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Releases: broadinstitute/scp-ingest-pipeline

1.6.3

01 Oct 12:56
564933b

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Fixed

  • Return metadata convention validation error messages to user (#148)
  • Gene model created for genes with no expression values in mtx parsing (#149 )
  • Fixing log level for parse successful messages (#147 )

1.6.2

09 Sep 16:28
3f67f18

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Fixed

  • Correct gene models for dense matrices and account for single column feature files (#145)

1.6.1

03 Sep 20:17
745cd1c

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Fixed

  • Fixes prior null release

1.6.0

02 Sep 16:43
a5f26f3

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Added

  • Port parsing of MTX from Rails to Ingest Pipeline (#132)
  • Script for ingest stress test (#135)

Changed

  • Refactor ingest logging (#103)
  • Refactor and add tests for dense matrices and expression files (#134)

Fixed

  • Fix client and function name (#142)
  • Handle "Connection reset by peer" errors for MongoDB from PAPI (#143)

1.5.7

20 Aug 01:53
a5f26f3

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Added

  • checks for mismatched rows in expression matrices (#138 )

Changed

Fixed

1.5.6

19 Aug 14:07
e12804f

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Fixed

  • Correctly query for cells from other matrix files to detect duplicate cells (#136)

Changed

  • Harden Genomes Pipeline and make_toy_data.py (#129)

1.5.5

17 Aug 20:33
42877c8

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###Added

  • Cross-file unique cell name validation (#124)
  • R-formatted file validation (#127)

###Changed

  • Made error reporting more granular (#126)

###Fixed

  • Fixed empty batch loading error (#130)

1.5.4

10 Aug 16:08
aa8035a

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Fixed

  • Correctly accounting for filtered row of expression scores when rounding (#125)

1.5.3

10 Aug 14:59
ef6c64c

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Fixed

  • Addressing off by one error w/ cell names, expression scores in dense ingest (#123)

1.5.2

07 Aug 19:15
f1ee8c7

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Fixed

  • Removing overwrite of cell names array in expression ingest (#122)