Releases: broadinstitute/scp-ingest-pipeline
Releases · broadinstitute/scp-ingest-pipeline
1.6.3
01 Oct 12:56
Compare
Sorry, something went wrong.
No results found
Fixed
Return metadata convention validation error messages to user (#148 )
Gene model created for genes with no expression values in mtx parsing (#149 )
Fixing log level for parse successful messages (#147 )
1.6.2
09 Sep 16:28
Compare
Sorry, something went wrong.
No results found
Fixed
Correct gene models for dense matrices and account for single column feature files (#145 )
1.6.1
03 Sep 20:17
Compare
Sorry, something went wrong.
No results found
1.6.0
02 Sep 16:43
Compare
Sorry, something went wrong.
No results found
Added
Port parsing of MTX from Rails to Ingest Pipeline (#132 )
Script for ingest stress test (#135 )
Changed
Refactor ingest logging (#103 )
Refactor and add tests for dense matrices and expression files (#134 )
Fixed
Fix client and function name (#142 )
Handle "Connection reset by peer" errors for MongoDB from PAPI (#143 )
1.5.7
20 Aug 01:53
Compare
Sorry, something went wrong.
No results found
Added
checks for mismatched rows in expression matrices (#138 )
Changed
Fixed
1.5.6
19 Aug 14:07
Compare
Sorry, something went wrong.
No results found
Fixed
Correctly query for cells from other matrix files to detect duplicate cells (#136 )
Changed
Harden Genomes Pipeline and make_toy_data.py (#129 )
1.5.5
17 Aug 20:33
Compare
Sorry, something went wrong.
No results found
###Added
Cross-file unique cell name validation (#124 )
R-formatted file validation (#127 )
###Changed
Made error reporting more granular (#126 )
###Fixed
Fixed empty batch loading error (#130 )
1.5.4
10 Aug 16:08
Compare
Sorry, something went wrong.
No results found
Fixed
Correctly accounting for filtered row of expression scores when rounding (#125 )
1.5.3
10 Aug 14:59
Compare
Sorry, something went wrong.
No results found
Fixed
Addressing off by one error w/ cell names, expression scores in dense ingest (#123 )
1.5.2
07 Aug 19:15
Compare
Sorry, something went wrong.
No results found
Fixed
Removing overwrite of cell names array in expression ingest (#122 )