Merge pull request #122 from broadinstitute/ea-add-cells

knapii-developments · web-flow · commit f1ee8c70624d · 2020-08-07T15:11:36.000-04:00
Ea add cells
diff --git a/ingest/expression_files/dense_ingestor.py b/ingest/expression_files/dense_ingestor.py
@@ -183,7 +183,6 @@ def transform(self):
                 row[1:], self.header
             )
             numeric_scores = DenseIngestor.process_row(valid_expression_scores)
-            cells = []
             gene = row[0]
             if gene in self.gene_names:
                 raise ValueError(f"Duplicate gene: {gene}")

Original file line number	Diff line number	Diff line change
`@@ -183,7 +183,6 @@ def transform(self):`
`183`	`183`	`row[1:], self.header`
`184`	`184`	`)`
`185`	`185`	`numeric_scores = DenseIngestor.process_row(valid_expression_scores)`
`186`		`- cells = []`
`187`	`186`	`gene = row[0]`
`188`	`187`	`if gene in self.gene_names:`
`189`	`188`	`raise ValueError(f"Duplicate gene: {gene}")`