Releases: broadinstitute/scp-ingest-pipeline
Releases · broadinstitute/scp-ingest-pipeline
1.13.0
01 Feb 16:27
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Added
Log ingest annotation validation errors to Mixpanel (#228 )
1.12.4
08 Dec 23:06
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Changed
Reject cluster file if coordinate value of NaN detected (#224 )
Validate nonconventional numeric metadata values are numeric (#225 )
Improve handling of "Excel drag" ontology ID error in Ingest Pipeline validation (#226 )
Fixed
Restore storage of numeric array-based metadata annotation values (#223 )
1.12.3
15 Nov 19:10
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Changed
Update matrix ingest error message to include value where ValueError occurs (#220 )
Store metadata annotations but not values for large group-based annotations (#221 )
1.12.2
26 Oct 18:54
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Changed
Include Exact Synonym as part of relaxed ontology label validation (#216 )
Fixed
Remove relocated IngestPipeline method (#218 )
1.12.1
15 Oct 14:23
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Changed
Relocated IngestPipeline method for metadata validation to CellMetadata Class (#216 )
Fixed
updated import statements to restore support for manage-study (#216 )
1.12.0
27 Sep 14:51
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Added
Correctly handle BulkWriteErrors and discard any documents that have already been saved (#214 )
Fixed
Addressed regression in ingest/genomes/utils.py w/ gzipped content writing (#214 )
1.11.0
08 Jun 14:56
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Added
Relax exact matching of ontology labels to allow synonyms (#211 )
1.10.2
18 Mar 13:25
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Fixed
Preserve leading 0s in cell metadata and cluster files. (#200 )
Store numeric arrays as group (#205 )
Added tests for cell metadata updates ( #209 )
Strip white space in metadata and cluster headers (#208 )
1.10.1
02 Mar 00:19
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Fixed
cluster subsample bug preventing subsample of clusters whose first cell was not the metadata file's first cell #207
1.10.0
03 Feb 20:12
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Added
adds user identifier in logs from Ingest Pipeline to Bard (#203 )