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Pull requests: Clinical-Genomics/cg

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Pull requests list

Fix Pacbio read calculation
#4748 opened Dec 1, 2025 by islean • Draft
15 tasks
1
1
Fix flow cell retrieval handling incorrect sequencing run path
#4747 opened Dec 1, 2025 by diitaz93 • Draft
15 tasks
1
Swap raredisease dev CLI commands to production commands
#4737 opened Nov 26, 2025 by diitaz93 Loading…
17 tasks
3
Swap command for Nallo
#4736 opened Nov 25, 2025 by RasmusBurge-CG Loading…
15 tasks
2
Add raredisease deepvariant reports to housekeeper bundle
#4734 opened Nov 25, 2025 by peterpru Loading…
1 of 17 tasks
1
@peterpru
2
Stop sending tower_ids.yaml path to Trailblazer
#4733 opened Nov 24, 2025 by mogmi • Draft
15 tasks
1
Make sample reads mandatory
#4728 opened Nov 19, 2025 by islean Loading…
15 tasks
8
possible-refactor
#4711 opened Nov 13, 2025 by RasmusBurge-CG Loading…
15 tasks
1
Test call to config case fails
#4710 opened Nov 13, 2025 by mogmi Loading…
15 tasks
1
Add analysis cascading
#4680 opened Oct 30, 2025 by islean • Draft
15 tasks
4
Rename is_sample_source_type_ffpe
#4670 opened Oct 27, 2025 by RasmusBurge-CG Loading…
15 tasks
4
Use other source when source is other
#4667 opened Oct 23, 2025 by islean • Draft
15 tasks
1
Fix the tests and coverage badge
#4646 opened Oct 7, 2025 by dnil Loading…
5 of 9 tasks
1
Make RNAFUSION samples be always tumour
#4537 opened Aug 1, 2025 by diitaz93 • Draft
2 of 12 tasks
2
23
Filter cancelled Samples for Tomte dna upload
#4498 opened Jul 8, 2025 by ahdamin Loading…
15 tasks
1
chore: create LICENSE file
#4472 opened Jun 26, 2025 by pbiology Loading…
1 of 3 tasks
1
Rnafusion 4
#4385 opened May 7, 2025 by rannick • Draft
15 tasks
3
work in progress: FreshDesk CLI
#4290 opened Mar 14, 2025 by RasmusBurge-CG • Draft
15 tasks
1
feat(keycloak authentication)
#4162 opened Jan 28, 2025 by ChrOertlin Loading…
15 tasks
1
22
Enable hidden analysis in TB to be uploaded
#4003 opened Dec 6, 2024 by eliottBo Loading…
1 of 15 tasks
1
@eliottBo
4
feat(update): Pydantic model
#3828 opened Oct 10, 2024 by henrikstranneheim Loading…
1 of 15 tasks
@henrikstranneheim
8
reduce-log-level-compress
#3811 opened Oct 7, 2024 by Vince-janv Loading…
2
feat/connect order to Freshdesk ticket
#3620 opened Aug 21, 2024 by ahdamin • Draft
1
feat/add freshdesk properties
#3576 opened Aug 15, 2024 by ahdamin Loading…
4
Remove pandas from gsaid api
#3393 opened Jul 4, 2024 by henrikstranneheim Loading…
1 of 15 tasks
@henrikstranneheim
16
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