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Releases: broadinstitute/scp-ingest-pipeline

1.17.1

19 Apr 15:15
f331419

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Fixed

  • __event_name correctly set when outer exception handling code is triggered (#248)

1.17.0

16 Apr 01:01
f7316c9

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Added

  • General try-except for better error observability in Sentry (#246)
  • Improved setup documentation (#245)

1.16.0

12 Apr 15:47
67024e4

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Added

  • Integration test for pilot DE process (#242)
  • Extended pilot DE process to accept sparse matrix inputs (#243)

Changed

  • Skip non-production tests, test_toy_data and test_genomes (#241)

1.15.0

29 Mar 14:24
3a9d12d

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Added

  • Prototype differential expression analysis via scanpy 1.8.2 (#238)

Changed

  • Update numpy 1.19.2 -> 1.21.5; pandas 1.1.3 -> 1.3.5 (#238)
  • Update pip in docker build to enable pandas install (#240)

1.14.2

01 Mar 17:37
52cb0ba

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Changed

  • include ValueError exceptions in Mixpanel logging (#236)

1.14.1

18 Feb 15:10
2701eb0

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Changed

  • Store ontology label in BigQuery instead of synonym (#234)

1.14.0

15 Feb 18:14
75cbef7

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Added

  • Log ingest annotation validation errors to Mixpanel (#232)

1.13.1

03 Feb 15:20
b437bbb

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Fixed

  • Fix conventional single numeric array-based metadata value handing (#230)

1.13.0

01 Feb 16:27
e5625e2

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Added

  • Log ingest annotation validation errors to Mixpanel (#228)

1.12.4

08 Dec 23:06

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Changed

  • Reject cluster file if coordinate value of NaN detected (#224)
  • Validate nonconventional numeric metadata values are numeric (#225)
  • Improve handling of "Excel drag" ontology ID error in Ingest Pipeline validation (#226 )

Fixed

  • Restore storage of numeric array-based metadata annotation values (#223)