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idea to add error catching to avoid core dump

Status: Open.

#72 In DavidsonGroup/flexiplex;

· yinshiyi opened on Dec 24, 2025

Segfault when demultiplexing without a UMI, only when using GH Actions build

bugSomething isn't workingSomething isn't working

Status: Open.

#70 In DavidsonGroup/flexiplex;

· olliecheng opened on Dec 11, 2025

Trim barcode regions even if no matching barcode

bugSomething isn't workingSomething isn't working

Status: Open.

#69 In DavidsonGroup/flexiplex;

· nadiadavidson opened on Nov 19, 2025

Add option to not trim reads but still report barcodes/UMIs in read ID

Status: Open.

#59 In DavidsonGroup/flexiplex;

· nadiadavidson opened on Jun 20, 2025

Wrap "" around ? in documentation

Status: Open.

#57 In DavidsonGroup/flexiplex;

· Shians opened on Jun 5, 2025

No output to stdout or txt file when running on trimmed fastq

Status: Open.

#56 In DavidsonGroup/flexiplex;

· Shians opened on Jun 5, 2025

uncaught exception of type std::out_of_range: basic_string

Status: Open.

#55 In DavidsonGroup/flexiplex;

· karolina16 opened on Jun 3, 2025

Extract reads where barcode was found in discovery mode

Status: Open.

#54 In DavidsonGroup/flexiplex;

· koehlek99 opened on Apr 25, 2025

Add ATAC barcode to defaults

enhancementNew feature or requestNew feature or request

Status: Open.

#49 In DavidsonGroup/flexiplex;

· nadiadavidson opened on Nov 19, 2024

Best practice for pipelines

Status: Open.

#48 In DavidsonGroup/flexiplex;

· ljwharbers opened on Nov 19, 2024

Enable barcode and UMI length to be given, instead of a sequence of ?'s

low-prioritySlight quality of life changesSlight quality of life changes

Status: Open.

#32 In DavidsonGroup/flexiplex;

· olliecheng opened on Nov 27, 2023

Add option to report reads with no match (output 2 files?)

enhancementNew feature or requestNew feature or request

Status: Open.

#5 In DavidsonGroup/flexiplex;

· nadiadavidson opened on Nov 10, 2022