Flush upload_to_zenodo.py log messages and add --skip-repo-checkout help message

.bumpversion.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 3.2.4
+current_version = 3.2.5
 commit = True
 tag = False
 

analysis_runner/_version.py

@@ -1,4 +1,4 @@
 """Can be used to access the version from the code"""
 
 # Do not edit this file directly, use bumpversion
-__version__ = '3.2.4'
+__version__ = '3.2.5'

analysis_runner/cli_analysisrunner.py

@@ -100,6 +100,7 @@ def add_analysis_runner_args(
     parser.add_argument(
         '--skip-repo-checkout',
         required=False,
+        help="Don't check out a repository of code to be run.",
         action='store_true',
     )
 

scripts/upload_to_zenodo.py

@@ -28,7 +28,7 @@ def download_from_gcs(local_path: str, gcs_path: str):
     (bucket_name, path) = gcs_path.removeprefix('gs://').split('/', maxsplit=1)
     bucket = storage_client.bucket(bucket_name)
     blob = bucket.blob(path)
-    print(f'Downloading {gcs_path} into {local_path}')
+    print(f'Downloading {gcs_path} into {local_path}', flush=True)
     blob.download_to_filename(local_path)
 
 
@@ -90,7 +90,7 @@ def main(
             response = requests.put(upload_url, data=fp, params=params, timeout=timeout)
 
         response.raise_for_status()
-        print(f'Uploaded {response.json()["size"]} bytes')
+        print(f'Uploaded {response.json()["size"]} bytes', flush=True)
         print()
 
         os.remove(tmp_filename)

setup.py

@@ -18,7 +18,7 @@ def read_file(filename: str) -> str:
 setuptools.setup(
     name=PKG,
     # This tag is automatically updated by bump2version
-    version='3.2.4',
+    version='3.2.5',
     description='Analysis runner to help make analysis results reproducible',
     long_description=read_file('README.md'),
     long_description_content_type='text/markdown',