Repositories list

• MultimodalRegistration

  Public
  Scritps for processing and viewing datasets from Xenium + CODEX experiments

  Jupyter Notebook

  •

  GNU Affero General Public License v3.0

  •0•0•0•0•Updated Nov 27, 2025Nov 27, 2025

• comet_tools

  Public
  Script to register and merge OME-TIFF files derived from interrupted COMET runs.

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Nov 24, 2025Nov 24, 2025

• sopa_comet_analysis

  Public
  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Sep 20, 2025Sep 20, 2025

• xenium_processing

  Public
  Python

  •0•0•0•0•Updated Aug 7, 2025Aug 7, 2025

• scOpenLabAdamant

  Public
  Adamant is a JSON schema-based metadata creation tool for various research data management workflows.

  JavaScript

  •

  MIT License

  •3•0•0•0•Updated Jul 15, 2025Jul 15, 2025

• spatial_analysis

  Public
  Jupyter Notebook

  •

  GNU Affero General Public License v3.0

  •0•1•0•0•Updated May 8, 2025May 8, 2025

• spatial_qc

  Public
  R

  •0•0•0•0•Updated Mar 29, 2024Mar 29, 2024

• resolve_processing_singularity_container

  Public
  0•0•0•0•Updated Mar 21, 2024Mar 21, 2024

• resolve_processing

  Public
  Python

  •0•1•0•0•Updated Mar 21, 2024Mar 21, 2024

• seurat_resolve_importer

  Public
  R

  •0•0•0•0•Updated Mar 21, 2024Mar 21, 2024

• geojson_seurat_cropper

  Public
  R

  •0•2•0•0•Updated Mar 20, 2024Mar 20, 2024