Skip to content
rdmorin edited this page Jan 11, 2025 · 19 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true nocite: | @arthurGenomewideDiscoverySomatic2018,

[[TOC]]

Relevance tier by entity

include:tables/table1_LPP.md

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 1.15
DLBCL Schmitz cohort 1.28
DLBCL Reddy cohort 1.30
DLBCL Chapuy cohort 0.85

Mutation pattern and selective pressure estimates

include:tables/dnds_LPP.md

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr3 187771678 187801626 TSS-1 NA
chr3 187801627 187813568 TSS-2 NA
chr3 187813569 187955254 TSS-3 NA
chr3 187955255 187969220 TSS-4 NA
chr3 188261523 188327097 TSS-5 NA
chr3 188377178 188401951 intron-1 NA
chr3 188401952 188461879 intron-2 NA
chr3 188461880 188474683 intron-3 NA
chr3 188474684 188491248 intron-4 NA

include:tables/browser_LPP.md

Expression

include:tables/mermaid_LPP.md

References

Disclaimer

The content in these pages has been populated, in part, by an automated process. Although we have scrutinized every page to ensure accuracy, errors will inevitably exist. If you find an error please report it as an issue and we will address it.

In particular, let us know if you feel that an important citation is missing or if a paper has been cited incorrectly.

License

This work is licensed under a Creative Commons Attribution 4.0 International License.

You are free to:

Share — copy and redistribute the material in any medium or format for any purpose, even commercially.

Adapt — remix, transform, and build upon the material for any purpose, even commercially. The licensor cannot revoke these freedoms as long as you follow the license terms.

Clone this wiki locally