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Melbourne Bioinformatics

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  1. MelBioInf_docs MelBioInf_docs Public

    Melbourne Bioinformatics documentation in markdown format

    HTML 110 79

  2. variant_calling_pipeline variant_calling_pipeline Public

    A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framework in Python.

    Python 33 26

  3. r-intro-biologists r-intro-biologists Public

    Forked from mblue9/r-intro-biologists

    HTML 8 2

  4. data_tidying_and_visualisation data_tidying_and_visualisation Public

    Forked from claresloggett/data_tidying_and_visualisation

    Workshops on Pandas, data tidying, and visualisation

    Jupyter Notebook 7 4

  5. R-genomics R-genomics Public

    Forked from tracykteal/R-genomics

    Lesson on data analysis and visualization in R for genomics

    HTML 6 1

  6. spank-private-tmp spank-private-tmp Public

    Forked from hpc2n/spank-private-tmp

    Slurm spank plugin to give each job private /tmp (and/or other dirs)

    C 4 1

Repositories

Showing 10 of 51 repositories
  • COMP90016 Public

    Material assoicated with teaching the subject COMP90016

    melbournebioinformatics/COMP90016’s past year of commit activity
    CSS 2 MIT 1 0 0 Updated Mar 2, 2025
  • intro-to-R Public
    melbournebioinformatics/intro-to-R’s past year of commit activity
    R 0 0 0 0 Updated Feb 25, 2025
  • workbench-template-md Public template Forked from carpentries/workbench-template-md

    TEMPLATE for markdown lessons

    melbournebioinformatics/workbench-template-md’s past year of commit activity
    0 23 0 0 Updated Feb 25, 2025
  • seurat-de Public

    Gene ontology analysis and integration for single-cell RNA-seq data

    melbournebioinformatics/seurat-de’s past year of commit activity
    R 0 0 0 0 Updated Feb 18, 2025
  • intro-to-git Public

    Intro to Git and GitHub for researchers

    melbournebioinformatics/intro-to-git’s past year of commit activity
    0 1 0 0 Updated Feb 18, 2025
  • workbench-template-rmd Public template Forked from carpentries/workbench-template-rmd

    MB/UoM TEMPLATE for R Markdown lessons

    melbournebioinformatics/workbench-template-rmd’s past year of commit activity
    R 0 13 0 0 Updated Feb 18, 2025
  • uom-varnish Public Forked from carpentries/varnish

    Template for pkgdown site

    melbournebioinformatics/uom-varnish’s past year of commit activity
    SCSS 0 35 0 0 Updated Feb 7, 2025
  • R_gc_content Public

    Example Git repository with R code to calculate GC content of a FASTA file.

    melbournebioinformatics/R_gc_content’s past year of commit activity
    R 1 MIT 11 0 0 Updated Dec 3, 2024
  • MelBioInf_docs Public

    Melbourne Bioinformatics documentation in markdown format

    melbournebioinformatics/MelBioInf_docs’s past year of commit activity
    HTML 110 79 0 0 Updated Dec 2, 2024
  • mb-workbench-template-md Public template Forked from carpentries/workbench-template-md

    TEMPLATE for markdown lessons

    melbournebioinformatics/mb-workbench-template-md’s past year of commit activity
    0 23 0 0 Updated Nov 19, 2024
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