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@melbournebioinformatics Melbourne Bioinformatics

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    67 repositories

    • intro-to-proteomics

      Public
      R
      •
      Other
      •2•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • research-data-management

      Public
      Other
      •1•0•0•1•Updated Aug 25, 2026Aug 25, 2026

    • intro-to-unix

      Public
      Dockerfile
      •
      Other
      •0•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • intro-to-git

      Public
      Intro to Git and GitHub for researchers
      Other
      •2•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • qiime2_dunnart

      Public
      R
      •
      Other
      •1•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • intro-to-r

      Public
      R
      •
      Other
      •0•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • workbench-template-md

      Public template
      TEMPLATE for markdown lessons
      Dockerfile
      •
      Other
      •30•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • seurat-de-2025

      Public
      scRNA-seq Differential Expression workshop
      R
      •
      Other
      •3•0•0•0•Updated Aug 18, 2026Aug 18, 2026

    • intro-to-rna-seq

      Public
      R
      •
      Other
      •0•0•0•0•Updated Aug 18, 2026Aug 18, 2026

    • rna-pathways

      Public
      R
      •
      Other
      •3•0•0•1•Updated Aug 18, 2026Aug 18, 2026

    • nectar-instances

      Public
      R
      •
      Other
      •0•0•0•1•Updated Aug 18, 2026Aug 18, 2026

    • workbench-template-rmd

      Public template
      MB/UoM TEMPLATE for R Markdown lessons
      R
      •
      Other
      •17•0•0•0•Updated Aug 18, 2026Aug 18, 2026

    • rna-seq-counts-to-genes

      Public
      An introduction to RNA-seq analysis: counts to differentially expressed genes
      R
      •
      Other
      •0•0•0•0•Updated Aug 18, 2026Aug 18, 2026

    • melbournebioinformatics.github.io

      Public
      Melbourne Bioinformatics documentation in markdown format
      HTML
      •80•117•1•0•Updated Aug 4, 2026Aug 4, 2026

    • COMP90014_resources

      Public
      Media and files for COMP90014
      0•0•0•0•Updated Jul 27, 2026Jul 27, 2026

    • uom-varnish

      Public
      UoM fork of the Carpentries 'varnish' template for pkgdown.
      SCSS
      •
      Other
      •67•0•0•0•Updated Jul 22, 2026Jul 22, 2026

    • COMP90016

      Public
      Material assoicated with teaching the subject COMP90016
      CSS
      •
      MIT License
      •1•4•0•0•Updated Jun 24, 2026Jun 24, 2026

    • intro-to-genome-browsers

      Public
      Melbourne Bioinformatics Introduction to Genome Browsers workshop materials.
      R
      •
      Other
      •1•0•0•0•Updated May 12, 2026May 12, 2026

    • Introduction-to-Unix

      Public
      R
      •
      Other
      •1•0•0•0•Updated May 12, 2026May 12, 2026

    • abacbs-2025-metagenomics-workshop

      Public
      Material for the "Making Sense of Metagenomes" workshop for ABACBS 2025 in Adelaide, SA.
      R
      •
      Other
      •0•1•0•0•Updated May 12, 2026May 12, 2026

    • MB-datasets

      Public
      Datasets used by Melbourne Bioinformatics for formal teaching, workshops, presentations, and whatever else your heart desires.
      0•0•0•0•Updated Apr 30, 2026Apr 30, 2026

    • training-infrastructure

      Public
      HCL
      •
      MIT License
      •4•1•0•0•Updated Apr 27, 2026Apr 27, 2026

    • intro-QIIME2-mammal

      Public
      Other
      •0•0•1•0•Updated Mar 6, 2026Mar 6, 2026

    • slurm-docker-cluster

      Public
      A Slurm cluster using docker-compose
      Shell
      •
      MIT License
      •269•0•0•0•Updated Feb 16, 2026Feb 16, 2026

    • mbite

      Public
      Repo for testing out relaunch of MBITE
      HTML
      •0•0•0•0•Updated Jan 20, 2026Jan 20, 2026

    • training-program-application-2026

      Public
      Repository for the training program exercise
      R
      •67•0•0•0•Updated Jan 12, 2026Jan 12, 2026

    • Variant-calling-using-GATK4

      Public
      Other
      •1•0•0•0•Updated Dec 16, 2025Dec 16, 2025

    • jupyterlite

      Public
      JupyterLite instance for Melbourne Bioinformatics
      Jupyter Notebook
      •0•0•0•0•Updated Dec 4, 2025Dec 4, 2025

    • python_gc_content

      Public
      Example Git repository with Python code to calculate GC content of a FASTA file.
      Python
      •44•1•1•4•Updated Aug 1, 2025Aug 1, 2025

    • COMP90016-envs

      Public
      Environment config settings for COMP90016 workshops and assignments.
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 12, 2025Jun 12, 2025
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