Feature: MACS3 Call variants #426
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The
callvarsubcommand has been added from SAPPER package. Source codes have been merged into MACS3 libraries. Thecallvarrelies on lh3's fermi-lite to do assembly at peaks when necessary. The modifiedfermi-litecodes have been added. The originalfermi-liteneedsklibwhich is implemented and tested under SSE2 CPUs, sosimdeis added according to lh3/bwa#283 to solve the compatibility issues on non-X86 architectures.It's related to #319