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  1. gghic gghic Public

    gghic makes visualization of Hi-C/-like data easily in R

    R 27 1

  2. LocusMasterTE LocusMasterTE Public

    Integrating long read sequencing enhances short read-based locus-specific transposable element quantification

    Python 10

  3. TMB TMB Public

    Tumour mutation burden correction

    2 1

  4. RNAseq-analysis-pipeline RNAseq-analysis-pipeline Public

    This guidebook aims to demonstrate the RNA-seq analysis pipeline and the basics statistical analysis behind Differential Gene expression detection

    Jupyter Notebook 2 2

  5. smk_sv smk_sv Public

    A snakemake pipeline to call structure variants from ONT data

    Python 2

  6. HKU-Practical-Bioinformatics HKU-Practical-Bioinformatics Public

    HTML 1

Repositories

Showing 10 of 23 repositories
  • CancerMutationDetectionCourse Public

    Google colab notebook for cancer mutation detection taster lecture

    jasonwong-lab/CancerMutationDetectionCourse’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 13, 2026
  • gghic Public

    gghic makes visualization of Hi-C/-like data easily in R

    jasonwong-lab/gghic’s past year of commit activity
    R 27 GPL-3.0 1 1 0 Updated Jan 23, 2026
  • cfDNA_deconv Public

    For deconvolution of cfDNA or other DNA mixture composition by leveraging read-level methylation signals

    jasonwong-lab/cfDNA_deconv’s past year of commit activity
    Python 0 0 0 0 Updated Jan 9, 2026
  • NPC_GeneSignature Public

    A cross-platform gene signature to predict survival outcomes for nasopharyngeal carcinoma

    jasonwong-lab/NPC_GeneSignature’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 2, 2026
  • smk_sv Public

    A snakemake pipeline to call structure variants from ONT data

    jasonwong-lab/smk_sv’s past year of commit activity
    Python 2 0 0 0 Updated Nov 7, 2025
  • jasonwong-lab/HKU-Practical-Bioinformatics’s past year of commit activity
    HTML 1 0 0 0 Updated Oct 27, 2025
  • git-and-github-rachelkhl Public Forked from jasonwong-lab/biof3002-2025-git-and-github-github-starter-course

    biof3002-2025-git-and-github-github-starter-course created by GitHub Classroom

    jasonwong-lab/git-and-github-rachelkhl’s past year of commit activity
    0 1 0 0 Updated Sep 26, 2025
  • biof3002-2025-git-and-github-github-starter-course Public

    biof3002-2025-git-and-github-github-starter-course created by GitHub Classroom

    jasonwong-lab/biof3002-2025-git-and-github-github-starter-course’s past year of commit activity
    0 1 0 0 Updated Sep 26, 2025
  • BIOF3001 Public

    Epigenetic clock

    jasonwong-lab/BIOF3001’s past year of commit activity
    0 MIT 0 0 0 Updated Sep 22, 2025
  • LocusMasterTE Public

    Integrating long read sequencing enhances short read-based locus-specific transposable element quantification

    jasonwong-lab/LocusMasterTE’s past year of commit activity
    Python 10 MIT 0 3 0 Updated May 12, 2025

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