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Pull requests: galaxyproject/tools-iuc

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Pull requests list

Update tools/gffcompare to 0.12.10
#7165 opened Jul 22, 2025 by SaimMomin12 Loading…
5 tasks
2
CI: cover Rmd files with styler
#7164 opened Jul 21, 2025 by bernt-matthias Loading…
3 of 5 tasks
Update nextclade to version 3.15.3
#7161 opened Jul 21, 2025 by pvanheus Loading…
3 of 5 tasks
2
Updating tools/mzmine from version 3.9.0 to 4.7.8
#7159 opened Jul 21, 2025 by gxydevbot Loading…
3
Updating tools/gffcompare from version 0.12.9 to 0.12.10
#7157 opened Jul 21, 2025 by gxydevbot Loading…
Updating tools/artic from version 1.7.3 to 1.7.5
#7156 opened Jul 21, 2025 by gxydevbot Loading…
2
Linter fix: chewbacca
#7154 opened Jul 18, 2025 by bernt-matthias Loading…
3 of 5 tasks
1
Pairtools fix output datatype
#7153 opened Jul 18, 2025 by bernt-matthias Loading…
3 of 5 tasks
2
Linter fix quast
#7152 opened Jul 18, 2025 by bernt-matthias Loading…
3 of 5 tasks
4
add alevin-fry
#7149 opened Jul 17, 2025 by dannyspadaro • Draft
3 of 5 tasks
New Tool Addition: AmpliGone, a tool to accurately find and remove primer sequences from NGS reads in an amplicon experiment
#7143 opened Jul 15, 2025 by lsterck Loading…
3 of 5 tasks
23
Add MetaSBT tool suite
#7141 opened Jul 14, 2025 by cumbof Loading…
3 of 5 tasks
47
Bump busco to 6.0.0
#7139 opened Jul 14, 2025 by bernt-matthias Loading…
3 of 6 tasks
1
Updating tools/mosdepth from version 0.3.10 to 0.3.11
#7135 opened Jul 14, 2025 by gxydevbot Loading…
1
Updating tools/iqtree from version 2.4.0 to 3.0.1
#7134 opened Jul 14, 2025 by gxydevbot Loading…
Add compress option pairtool wrapper
#7127 opened Jul 9, 2025 by Smeds Loading…
5 tasks
16
add icon for mitos2
#7121 opened Jul 9, 2025 by bernt-matthias Loading…
3 of 5 tasks
3
Updating tools/orthofinder from version 2.5.5 to 3.1.0
#7118 opened Jul 7, 2025 by gxydevbot Loading…
Add COMEBin
#7110 opened Jul 3, 2025 by SantaMcCloud • Draft
3 of 5 tasks
5
tool wrappers for LexicMap
#7106 opened Jun 30, 2025 by Smeds Loading…
5 tasks
3
Update table compute - Change rangemaker logic to allow pandas like indexing
#7105 opened Jun 30, 2025 by paulzierep Loading…
3 of 5 tasks
1
16
un-quotes the region list so chr1 chr2 will not be passed as an inval…
#7086 opened Jun 28, 2025 by bwlang Loading…
2 of 5 tasks
Add genome_uploader
#7084 opened Jun 27, 2025 by SantaMcCloud Loading…
3 of 5 tasks
5
Update snapatac2 to version 2.8.0
#7078 opened Jun 26, 2025 by nilchia • Draft
3 of 5 tasks
2
Upgrade samtools dependencies
#7068 opened Jun 20, 2025 by bwlang Loading…
3 of 5 tasks
10
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