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114 followers · 69 following

Achievements

Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx3Achievement: Starstruckx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx3Achievement: Starstruckx2Achievement: Arctic Code Vault Contributor

Organizations

@monarch-initiative @UCLA-BD2K @bioenergy-research-centers

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caufieldjh/README.md

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  1. awesome-bioie Public

    🧫 A curated list of resources relevant to doing Biomedical Information Extraction (including BioNLP)

    371 33

  2. monarch-initiative/ontogpt Public

    LLM-based ontological extraction tools, including SPIRES

    Jupyter Notebook 671 92

  3. Knowledge-Graph-Hub/kg-obo Public

    A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub

    Python 32 2

  4. monarch-initiative/curategpt Public

    LLM-driven curation assist tool

    Jupyter Notebook 84 13

  5. Knowledge-Graph-Hub/kg-phenio Public

    A graph for accessing and comparing knowledge concerning phenotypes across species and genetic backgrounds.

    Python 5 4

  6. Knowledge-Graph-Hub/kg-registry Public

    A simple registry for KGHub projects

    Python 5 1

3,409 contributions in the last year

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Activity overview

Contributed to Knowledge-Graph-Hub/kg-registry, monarch-initiative/ontogpt, bridge2ai/b2ai-standards-registry and 59 other repositories
Loading A graph representing caufieldjh's contributions from April 14, 2024 to April 18, 2025. The contributions are 75% commits, 12% pull requests, 10% issues, 3% code review.

Contribution activity

April 2025

Created 1 repository

Created a pull request in mapping-commons/rda-fair-mappings that received 3 comments

Fix format in docs workflow

+2 −2 lines changed • 3 comments
Reviewed 15 pull requests in 4 repositories

Created an issue in Knowledge-Graph-Hub/knowledge-graph-hub-support that received 8 comments

Do not run Jenkins KG build when commit is made to main

See Knowledge-Graph-Hub/kg-alzheimers#19 Currently, most KG-Hub KGs run their Jenkins build pipeline upon any commit to main. This isn't entirely n…

8 comments
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