Do not load already loaded things [VS-1804]#9348

Draft

mcovarr wants to merge 68 commits intoah_var_storefrom

vs_1804_do_not_load_already_loaded_things

Commits on Sep 19, 2025

pulling over initial parquet changes
koncheto-broad
committed

Commits on Oct 8, 2025

no more build issues
koncheto-broad
committed

Commits on Oct 9, 2025

Cherry picking in and modifying parquet code for header and ref data

RoriCremer
authored and
koncheto-broad
committed
updating header and ref code
koncheto-broad
committed

Commits on Oct 14, 2025

Commits on Oct 15, 2025

Commits on Oct 16, 2025

making directory names consistent
koncheto-broad
committed

Commits on Oct 28, 2025

Commits on Oct 29, 2025

Commits on Nov 17, 2025

updating the parquet file loading to better handle interruptions
koncheto-broad
committed

Commits on Nov 18, 2025

Commits on Nov 21, 2025

Adding lifecycle rules so the parquet files auto-delete after 14 days
koncheto-broad
committed

Commits on Dec 3, 2025

Adding useful documentation
koncheto-broad
committed

Commits on Dec 8, 2025

moving docs around
koncheto-broad
committed

Commits on Jan 28, 2026

VS-1785 - Update Parquet branch to latest in ah_var_store (#9310)

gbggrant
and
mcovarr
authored

Commits on Feb 19, 2026

VS-1810 add sample id to parquet tracking table (#9333)

gbggrant
and
mcovarr
authored

Commits on Feb 24, 2026

VS-1793 investigate failing tests (#9335)
gbggrant
authored

Commits on Feb 25, 2026

Commits on Feb 26, 2026

Prep for merge [VS-1800] (#9327)
mcovarr
authored

Commits on Mar 5, 2026

Fix Parquet exome NPE, compressed refs [VS-1799] [VS-1801] (#9329)
mcovarr
authored

Commits on Mar 6, 2026

VS-1794 parquet removal strategy (#9337)
gbggrant
authored

Commits on Mar 9, 2026

Parquet ploidy loading [VS-1809] (#9334)
mcovarr
authored

Commits on Mar 10, 2026

VS-1779 clean up parquet files immediatement (#9338)
gbggrant
authored

Commits on Mar 11, 2026

Commits on Mar 12, 2026