Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Mark geneformer test_pretrain_cli as slow #651

Merged
merged 2 commits into from
Jan 23, 2025

Conversation

pstjohn
Copy link
Collaborator

@pstjohn pstjohn commented Jan 23, 2025

This is one remaining outlier in our current test suite that takes a long time to run (~3 minutes by itself). https://app.codecov.io/gh/NVIDIA/bionemo-framework/tests/main

With #634 we'll run these tests anyways during the merge queue step, but marking this as slow should speed up the coverage runs in PRs and post-merge

@pstjohn pstjohn added the SKIP_CI Completely skips the CI pipeline label Jan 23, 2025
Copy link
Collaborator

@jstjohn jstjohn left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Can you also make a task to speed this test up and remove the slow marker? It shouldn't be hard.

This is one remaining outlier in our current test suite that takes a long time to run (~3 minutes by itself). https://app.codecov.io/gh/NVIDIA/bionemo-framework/tests/main

With #634 we'll run these tests anyways during the merge queue step, but marking this as slow should speed up the coverage runs in PRs and post-merge

Signed-off-by: Peter St. John <[email protected]>
Signed-off-by: Peter St. John <[email protected]>
@pstjohn pstjohn force-pushed the pstjohn/mark-pretrain-cli-as-slow branch from d16b10d to 2039967 Compare January 23, 2025 20:57
@pstjohn pstjohn added this pull request to the merge queue Jan 23, 2025
Merged via the queue into main with commit 6297e12 Jan 23, 2025
7 checks passed
@pstjohn pstjohn deleted the pstjohn/mark-pretrain-cli-as-slow branch January 23, 2025 23:25
polinabinder1 pushed a commit that referenced this pull request Jan 28, 2025
This is one remaining outlier in our current test suite that takes a
long time to run (~3 minutes by itself).
https://app.codecov.io/gh/NVIDIA/bionemo-framework/tests/main

With #634 we'll run these tests anyways during the merge queue step, but
marking this as slow should speed up the coverage runs in PRs and
post-merge

---------

Signed-off-by: Peter St. John <[email protected]>
Signed-off-by: Polina Binder <[email protected]>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
SKIP_CI Completely skips the CI pipeline
Projects
None yet
Development

Successfully merging this pull request may close these issues.

4 participants