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Add raredisease deepvariant reports to housekeeper bundle #4734

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Add raredisease deepvariant reports to housekeeper bundle #4734

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5fc69d2
add raredisease deepvariant reports to storing
peterpru Nov 25, 2025
2ed69c9
Merge branch 'master' into raredisease-add-deepvariant-report-storing
peterpru Dec 2, 2025
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5 changes: 5 additions & 0 deletions cg/resources/raredisease_bundle_filenames.yaml
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Expand Up @@ -253,6 +253,11 @@
path: PATHTOCASE/call_snv/genome/CASEID_snv.vcf.gz.tbi
step: call_snv
tag: call_snv_index
- format: meta
id: SAMPLEID
path: PATHTOCASE/call_snv/genome/SAMPLEID_deepvar.visual_report.html
step: deepvariant
tag: report
- format: vcf
id: CASEID
path: PATHTOCASE/call_snv/mitochondria/CASEID_mitochondria.vcf.gz
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