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Filter cancelled Samples for Tomte dna upload #4498

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8 changes: 2 additions & 6 deletions cg/store/crud/read.py
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Original file line number Diff line number Diff line change
Expand Up @@ -8,12 +8,7 @@
from sqlalchemy.orm import Query

from cg.constants import SequencingRunDataAvailability, Workflow
from cg.constants.constants import (
DNA_WORKFLOWS_WITH_SCOUT_UPLOAD,
CaseActions,
CustomerId,
SampleType,
)
from cg.constants.constants import DNA_WORKFLOWS_WITH_SCOUT_UPLOAD, CustomerId, SampleType
from cg.constants.priority import SlurmQos
from cg.constants.sequencing import DNA_PREP_CATEGORIES, SeqLibraryPrepCategory
from cg.exc import (
Expand Down Expand Up @@ -1642,6 +1637,7 @@ def _get_related_samples_query(
SampleFilter.BY_SUBJECT_ID,
SampleFilter.BY_TUMOUR,
SampleFilter.BY_CUSTOMER_ENTRY_IDS,
SampleFilter.IS_NOT_CANCELLED,
],
)
if samples.count() != 1:
Expand Down
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