Konsti recorders #6

KonstiNik · 2024-05-31T19:23:38Z

No description provided.

Create a test for - BaseMeasurement

… a dict of np.arrays.

- write gather method for base recorder

- Neural State - Neural State Creator - Data Set Recorder From the package. These things have been implemented in ZnNL

…yrus into Konsti_Measurements

Removed print statement

SamTov

I only looked at the data storage parts as the rest look like holdovers from the last PR.

knikolaou and others added 30 commits May 8, 2024 17:37

Include correct license in pyproject

2930a4a

Update gitignore to ignore specific vscode settings.

ff85c1c

Include header in existing files.

c445c4a

Create BaseMeasurement Class

5255ea7

Deactivate Black on PRs

0935135

- Write BaseMeasurement class work

149ad97

Create a test for - BaseMeasurement

remove dummy test

05082db

add temporal test notebook

d1febf4

Start writing measurements

da09517

Start writing matrix utils and according tests

ec50534

remove file for entropy measurement

fd1fbdf

run black

a4d83e9

Fix signs in testing eigenspace computation

f1d1ad6

try fixing numpy installation

e9cb663

Fix missing numpy installation in developer mode

546b6fe

fix base_measurement test

d11195f

Write matrix utils

373e785

Implement analysis utils and tests

0454c87

remove unnessecary inputs from tests

845e79b

make kwargs of shannon and von neuman entropy similar

e47b92f

write default measurements

1ffb9e8

run isort

463a8a8

Write init for measurements

41c82ec

Introduce neural states as a state representation of an NN in form of…

024dbe7

… a dict of np.arrays.

Start writing measurements example notebook.

5d2b429

run black and isort

06313df

remove unnecessary import

e1128ed

declare type hint of neural state

ae13f23

remove unused imports

4b63f0b

Add test for neural state keys

510ffb3

knikolaou and others added 22 commits May 16, 2024 16:53

- Use tempfile for recorder testing

004ce7a

- write gather method for base recorder

correct the overwrite method

8a9ddd7

Add option to the recorder to store in any case, ignoring the chunk size

539b98a

use the gather method to store data

51ed98a

Include NTK measurement in imports

8ca062b

Merge branch 'Konsti_Measurements' into Konsti_Recorders

b927df2

Remove

afdc77c

- Neural State - Neural State Creator - Data Set Recorder From the package. These things have been implemented in ZnNL

Adapt measurements notebook example

b8807e6

write loss derivative measurement.

a802a6d

write loss derivative measurement.

7e2184a

Remove the public kwarg from measurements

0300ab3

Merge branch 'Konsti_Measurements' of https://github.com/zincware/pap…

b54db51

…yrus into Konsti_Measurements

remove public kwarg from loss derivative

fb30d6a

Merge branch 'Konsti_Measurements' into Konsti_Recorders

c896254

inlcude loss derivative in init

0fa1a4d

Include hdf5 data storage [unfinished]

1662a66

Finish testing for recorders using h5py data storage

edc5ba1

Remove unused clear database fn

5c942fb

add h5py to deve requirements

92c450f

remove todos from docstrings

6c20b57

Save recorder names properly

e7ffb67

Update test_matrix_utils.py

777af32

Removed print statement

SamTov approved these changes Jun 10, 2024

View reviewed changes

knikolaou added 6 commits June 10, 2024 09:59

Re-name analysis utils test module

7ccd77a

rename grammian to gramian

c16efc2

Merge branch 'Konsti_Measurements' into Konsti_Recorders

da20acf

Merge branch 'main' into Konsti_Recorders

35433db

Remove Neural State since unused

b845fb0

Fix header of init

001e9ff

KonstiNik merged commit 4290300 into main Jun 10, 2024
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Konsti recorders #6

Konsti recorders #6

KonstiNik commented May 31, 2024

SamTov left a comment

Konsti recorders #6

Konsti recorders #6

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KonstiNik commented May 31, 2024

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