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1. RNA-MSM RNA-MSM Public

   Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding and attention map to match different types of downstream tasks.

   Python 61 6

2. Atomas Atomas Public

   ICLR 2025: We propose Atomas, a hierarchical molecular representation learning framework that jointly learns representations from SMILES strings and text. We design a Hierarchical Adaptive Alignmen…

   Python 6 1

3. MethylGPT MethylGPT Public

   Forked from albert-ying/MethylGPT

   This is the official codebase for methylGPT : a foundation model for the DNA methylome.

   Jupyter Notebook