Fixing paths to the correct tutorial folder on the github repo in the…

… tutorials files
wannier-developers · Feb 16, 2024 · 4a5902a · 4a5902a
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diff --git a/docs/docs/tutorials/tutorial_1.md b/docs/docs/tutorials/tutorial_1.md
@@ -6,8 +6,8 @@
     pseudopotentials and a <br> 
     2$\times$2$\times$2 k-point grid. Starting guess: four bond-centred Gaussians.*
 
--   Directory: `tutorials/tutorial01/` *Files can be
-    downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial01)*
+-   Directory: `tutorials/tutorial01/` *Files can be downloaded from 
+    [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial01)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_10.md b/docs/docs/tutorials/tutorial_10.md
@@ -2,7 +2,8 @@
 
 -   Outline: *Obtain MLWFs for graphite (AB, Bernal)*
 
--   Directory: `tutorials/tutorial10/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial10)*
+-   Directory: `tutorials/tutorial10/` *Files can be downloaded from 
+    [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial10)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_11.md b/docs/docs/tutorials/tutorial_11.md
@@ -4,7 +4,7 @@
 
 -   Outline: *Obtain MLWFs for the valence bands of silicon.*
 
--   Directory: `tutorials/tutorial11/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial11)*
+-   Directory: `tutorials/tutorial11/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial11)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_12.md b/docs/docs/tutorials/tutorial_12.md
@@ -4,7 +4,7 @@
 
 -   Outline: *Obtain MLWFs for the valence states of benzene*
 
--   Directory: `tutorials/tutorial12/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial12)*
+-   Directory: `tutorials/tutorial12/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial12)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_13.md b/docs/docs/tutorials/tutorial_13.md
@@ -3,7 +3,7 @@
 -   Outline: *Obtain the bandstructure, quantum conductance and density
     of states of a metallic (5,5) carbon nanotube*
 
--   Directory: `tutorials/tutorial13/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial13)*
+-   Directory: `tutorials/tutorial13/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial13)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_14.md b/docs/docs/tutorials/tutorial_14.md
@@ -4,8 +4,8 @@
     of Sodium atoms with that of a defected chain*
 
 -   Directories: `tutorials/tutorial14/periodic`<br>
-    &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;  `tutorial/tutorial14/defected`<br> 
-    *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial14)*
+    &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;  `tutorials/tutorial14/defected`<br> 
+    *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial14)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_15.md b/docs/docs/tutorials/tutorial_15.md
@@ -8,7 +8,7 @@ structure calculations.*
 -   Outline: *Obtain the quantum conductance of a pristine single-walled
     carbon nanotube*
 
--   Directory: `tutorials/tutorial14/periodic` *Files can be downloaded fron [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial15)*
+-   Directory: `tutorials/tutorial14/periodic` *Files can be downloaded fron [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial15)*
 
 -   Input Files
 
@@ -37,7 +37,7 @@ compare the quantum conductance of this system with a defected nanotube.
 -   Outline: *Use the automated LCR routine to investigate the effect of
     a single silicon atom in a infinite (5,0) carbon nanotube.*
 
--   Directory: `tutorial/tutorial15/defected` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial15)*
+-   Directory: `tutorials/tutorial15/defected` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial15)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_16.md b/docs/docs/tutorials/tutorial_16.md
@@ -7,7 +7,7 @@
 
 ## If you want to use Quantum ESPRESSO {#if-you-want-to-use-quantum-espresso .unnumbered}
 
--   Directory: `tutorials/tutorial16-withqe/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial16)*
+-   Directory: `tutorials/tutorial16-withqe/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial16)*
 
 -   Input Files
 
@@ -23,7 +23,7 @@
 
 ## If you do not want to use Quantum ESPRESSO {#if-you-do-not-want-to-use-quantum-espresso .unnumbered}
 
--   Directory: `tutorial/tutorial16-noqe/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial16)*
+-   Directory: `tutorials/tutorial16-noqe/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial16)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_17.md b/docs/docs/tutorials/tutorial_17.md
@@ -9,7 +9,7 @@ interface.
 -   Outline: *Plot the spin-orbit-coupled bands of ferromagnetic bcc Fe.
     Plot the Fermi-surface contours on a plane in the Brillouin zone.*
 
--   Directory: `tutorials/tutorial17/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial17)*
+-   Directory: `tutorials/tutorial17/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial17)*
 
 -   Input files
 

diff --git a/docs/docs/tutorials/tutorial_18.md b/docs/docs/tutorials/tutorial_18.md
@@ -8,7 +8,7 @@ interface.
     Fe with spin-orbit coupling. In preparation for this tutorial it may
     be useful to read Ref. [@yao-prl04] and Ch. 11 of the User Guide.*
 
--   Directory: `tutorials/tutorial18/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial18)*
+-   Directory: `tutorials/tutorial18/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial18)*
 
 -   Input files
 

diff --git a/docs/docs/tutorials/tutorial_19.md b/docs/docs/tutorials/tutorial_19.md
@@ -6,7 +6,7 @@ interface.
 -   Outline: *Calculate the orbital magnetization of ferromagnetic bcc
     Fe by Wannier interpolation.*
 
--   Directory: `tutorials/tutorial19/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial19)*
+-   Directory: `tutorials/tutorial19/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial19)*
 
 -   Input files
 

diff --git a/docs/docs/tutorials/tutorial_2.md b/docs/docs/tutorials/tutorial_2.md
@@ -8,7 +8,7 @@
     4$\times$4$\times$4 k-point grid.
     Starting guess: atom-centred sp$^3$ hybrid orbitals*
 
--   Directory: `tutorials/tutorial02/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial02)*
+-   Directory: `tutorials/tutorial02/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial02)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_20.md b/docs/docs/tutorials/tutorial_20.md
@@ -4,7 +4,7 @@
 
 -   Outline: *Obtain disentangled MLWFs for strained LaVO$_3$.*
 
--   Directory: `tutorials/tutorial20/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial20)*
+-   Directory: `tutorials/tutorial20/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial20)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_21.md b/docs/docs/tutorials/tutorial_21.md
@@ -8,7 +8,7 @@ interface.
     symmetry-adapted Wannier functions, see R. Sakuma, Phys. Rev. B
     **87**, 235109 (2013).*
 
--   Directory: `tutorials/tutorial21/atom_centered_As_sp/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial21)*
+-   Directory: `tutorials/tutorial21/atom_centered_As_sp/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial21)*
 
 -   Input Files
 
@@ -58,6 +58,6 @@ interface.
     ```
 
 Each directory creates different kind of symmetry-adapted Wannier
-function. See more detail in `tutorials/tutorial21/README`.
+function. See more detail in `tree/develop/tutorials/tutorial21/README`.
 
 
diff --git a/docs/docs/tutorials/tutorial_22.md b/docs/docs/tutorials/tutorial_22.md
@@ -10,7 +10,7 @@ interface.
     theoretical background of the symmetry-adapted Wannier functions,
     see R. Sakuma, Phys. Rev. B **87**, 235109 (2013).*
 
--   Directory: `tutorials/tutorial22/s_at_0.00/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial22)*
+-   Directory: `tutorials/tutorial22/s_at_0.00/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial22)*
     \
 
 -   Input Files

diff --git a/docs/docs/tutorials/tutorial_23.md b/docs/docs/tutorials/tutorial_23.md
@@ -8,7 +8,7 @@ post-processing code of `yambo`.
     `yambo` code, the quasi-particle corrections (QP) are summed to
     Kohn-Sham eigenvalues, while the wavefunctions remain the same. *
 
--   Directory: `tutorials/tutorial23/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial23)*
+-   Directory: `tutorials/tutorial23/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial23)*
 
 -   Input Files
 
@@ -54,7 +54,7 @@ post-processing code of `yambo`.
     grid into the 8x8x8 reduced grid
 
     ```bash title="Terminal"
-    ./k_mapper.py 4 4 4 "../tutorials/tutorial23/WORK/nscf.gw.out"
+    ./k_mapper.py 4 4 4 "..tutorials/tutorial23/WORK/nscf.gw.out"
     ```
 
     Use the output to complete the `yambo.in` input file (you also need

diff --git a/docs/docs/tutorials/tutorial_24.md b/docs/docs/tutorials/tutorial_24.md
@@ -3,7 +3,7 @@
 -   Outline: *Calculate the gyrotropic effects in trigonal right-handed
     Te* Similar to the calculations of [@tsirkin-arxiv17]
 
--   Directory: `tutorials/tutorial24/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial24)*
+-   Directory: `tutorials/tutorial24/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial24)*
 
 -   Input files
 

diff --git a/docs/docs/tutorials/tutorial_25.md b/docs/docs/tutorials/tutorial_25.md
@@ -4,7 +4,7 @@
     asymmetric fcc Gallium Arsenide. In preparation for this tutorial it
     may be useful to read Ref. [@ibanez-azpiroz_ab_2018]*
 
--   Directory: `tutorials/tutorial25/` *Files can be downlowaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial25)*
+-   Directory: `tutorials/tutorial25/` *Files can be downlowaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial25)*
 
 -   Input files:
 

diff --git a/docs/docs/tutorials/tutorial_26.md b/docs/docs/tutorials/tutorial_26.md
@@ -5,7 +5,7 @@
     Ref. [@Marianetti], which is essential reading for this tutorial
     tutorial.*
 
--   Directory: `tutorials/tutorial26/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial26)*
+-   Directory: `tutorials/tutorial26/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial26)*
 
 -   Input files:
 

diff --git a/docs/docs/tutorials/tutorial_27.md b/docs/docs/tutorials/tutorial_27.md
@@ -12,7 +12,7 @@ post-processing code of `Quantum ESPRESSO` (v6.4 or above).
     methods explained in Ref. [@LinLin-ArXiv2017]. More info on the
     keywords related to the SCDM method may be found in the user_guide.*
 
--   Directory: `tutorials/tutorial27/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial27)*
+-   Directory: `tutorials/tutorial27/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial27)*
 
 -   Input Files: `input_files`, and in the three subfolders
     `isolated, erfc` and `gaussian`. The `input_files` folder contains:

diff --git a/docs/docs/tutorials/tutorial_28.md b/docs/docs/tutorials/tutorial_28.md
@@ -4,7 +4,7 @@
     them in Gaussian cube format*
 
 -   Directory: `tutorials/tutorial28/` *The input files for this tutorials
-    are the same as the ones in Tutorial [5](tutorial_5.md#diamond-mlwfs-for-the-valence-bands) and can be downloaded [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial28)*
+    are the same as the ones in Tutorial [5](tutorial_5.md#diamond-mlwfs-for-the-valence-bands) and can be downloaded [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial28)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_29.md b/docs/docs/tutorials/tutorial_29.md
@@ -7,7 +7,7 @@
     the [berry_task=shc: spin Hall conductivity](../user_guide/postw90/berry.md#sec:shc) 
     chapter of the User Guide.*
 
--   Directory: `tutorials/tutorial29/` *Files can be downloaded [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial29)*
+-   Directory: `tutorials/tutorial29/` *Files can be downloaded [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial29)*
 
 -   Input files
 

diff --git a/docs/docs/tutorials/tutorial_3.md b/docs/docs/tutorials/tutorial_3.md
@@ -8,7 +8,7 @@
     4$\times$4$\times$4 k-point grid.
     Starting guess: atom-centred sp$^3$ hybrid orbitals*
 
--   Directory: `tutorials/tutorial03/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial03)*
+-   Directory: `tutorials/tutorial03/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial03)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_30.md b/docs/docs/tutorials/tutorial_30.md
@@ -7,7 +7,8 @@
     [berry_task=shc: spin Hall conductivity](../user_guide/postw90/berry.md#sec:shc) 
     chapter of the User Guide.*
 
--   Directory: `tutorials/tutorial30/`
+-   Directory: `tutorials/tutorial30/` *Files can downloaded from 
+    [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial30)*
 
 -   Input files
 

diff --git a/docs/docs/tutorials/tutorial_31.md b/docs/docs/tutorials/tutorial_31.md
@@ -16,7 +16,8 @@ post-processing code of `Quantum ESPRESSO` (v6.3 or above).
     spin-noncollinear systems. For the overview of the use of SCDM
     method to spinless systems, please refer to this [tutorial](tutorial_27.md).
 
--   Directory: `tutorials/tutorial31/`
+-   Directory: `tutorials/tutorial31/` *Files can be downloaded from
+    [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial31)*
 
     The input files for this tutorials are similar to the ones in Tutorial 
     [29](tutorial_29.md#platinum-spin-hall-conductivity), except that a coarser k-point grid is used and that the keywords

diff --git a/docs/docs/tutorials/tutorial_32.md b/docs/docs/tutorials/tutorial_32.md
@@ -11,7 +11,7 @@
     can be downloaded from the MaterialsCloud
     website[@MaterialsCloudArchiveEntry].
 
--   Directory: `tutorials/tutorial32/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial32)*
+-   Directory: `tutorials/tutorial32/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial32)*
 
 -   Input files
 

diff --git a/docs/docs/tutorials/tutorial_33.md b/docs/docs/tutorials/tutorial_33.md
@@ -5,7 +5,7 @@
     preparation for this example it may be useful to read Ref.
     [@ibanez-azpiroz-ArXiv2019]*
 
--   Directory: `tutorial/tutorial33/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial33)*
+-   Directory: `tutorial/tutorial33/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial33)*
 
 -   Input files:
 

diff --git a/docs/docs/tutorials/tutorial_4.md b/docs/docs/tutorials/tutorial_4.md
@@ -9,7 +9,7 @@
     Starting guess: five atom-centred d orbitals, and two s orbitals
     centred on one of each of the two tetrahedral interstices.*
 
--   Directory: `tutorials/tutorial04/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial04)*
+-   Directory: `tutorials/tutorial04/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial04)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_5.md b/docs/docs/tutorials/tutorial_5.md
@@ -2,7 +2,8 @@
 
 -   Outline: *Obtain MLWFs for the valence bands of diamond*
 
--   Directory: `tutorials/tutorial05/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial05)*
+-   Directory: `tutorials/tutorial05/` *Files can be downloaded from 
+    [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial05)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_6.md b/docs/docs/tutorials/tutorial_6.md
@@ -3,7 +3,8 @@
 -   Outline: *Obtain MLWFs to describe the states around the Fermi-level
     in copper*
 
--   Directory: `tutorials/tutorial06/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial06)*
+-   Directory: `tutorials/tutorial06/` *Files can be downloaded from 
+    [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial06)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_7.md b/docs/docs/tutorials/tutorial_7.md
@@ -3,7 +3,8 @@
 -   Outline: *Obtain MLWFs for the occupied states of molecular silane.
     $\Gamma$-point sampling*
 
--   Directory: `tutorials/tutorial07/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial07)*
+-   Directory: `tutorials/tutorial07/` *Files can be downloaded from 
+    [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial07)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_8.md b/docs/docs/tutorials/tutorial_8.md
@@ -4,7 +4,8 @@
     functions for ferromagnetic bcc Fe. Calculate the total and
     orbital-projected density of states by Wannier interpolation.*
 
--   Directory: `tutorials/tutorial08/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial08)*
+-   Directory: `tutorials/tutorial08/` *Files can be downloaded from 
+    [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial08)*
 
 -   Input Files
 

diff --git a/docs/docs/tutorials/tutorial_9.md b/docs/docs/tutorials/tutorial_9.md
@@ -2,7 +2,8 @@
 
 -   Outline: *Obtain MLWFs for a perovskite*
 
--   Directory: `tutorials/tutorial09/` *Files can be downloaded from [here](https://github.com/wannier-developers/wannier90/tutorials/tutorial09)*
+-   Directory: `tutorials/tutorial09/` *Files can be downloaded from 
+    [here](https://github.com/wannier-developers/wannier90/tree/develop/tutorials/tutorial09)*
 
 -   Input Files