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Setting a batch analysis for single alignment-wide ω

Status: Open.

#1955 In veg/hyphy;

· desmodus1984 opened on Jan 31, 2026

RELAX error

Status: Open.

#1953 In veg/hyphy;

· omario7777 opened on Jan 28, 2026

FUBAR Error

Status: Open.

#1952 In veg/hyphy;

· Ryu18th opened on Jan 27, 2026

Separating lineage vs. trait signal in a clustered topology with a nested anchor

Status: Open.

#1951 In veg/hyphy;

· LilaBL opened on Jan 22, 2026

MoleRate implementation in HyPhy

Status: Open.

#1945 In veg/hyphy;

· nicolasmalexandre opened on Dec 30, 2025

Internal error in _List* _TheTree::RecoverAncestralSequences

Status: Open.

#1944 In veg/hyphy;

· myrmecobrian opened on Dec 27, 2025

BUSTED-PH Multiple Hit error

Status: Open.

#1940 In veg/hyphy;

· qitingcai opened on Dec 18, 2025

Test failure (tests/hbltests/UnitTests/HBLCommands/Eval.bf)

Status: Open.

#1936 In veg/hyphy;

· Jehops opened on Dec 7, 2025

Datamonkey Fails to Recognize The Test Branches Selected

Status: Open.

#1934 In veg/hyphy;

· Sa1amanda opened on Dec 5, 2025

Visualizing Contrast fel results

Status: Open.

#1932 In veg/hyphy;

· aniketnaik7 opened on Nov 20, 2025