The Journal of Open Source Software
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Jul 26, 2026 - Ruby
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scientific-software
Here are 156 public repositories matching this topic...
EasyBuild - building software with ease
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Jun 19, 2026 - Shell
A collection of easyconfig files that describe which software to build using which build options with EasyBuild.
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Aug 7, 2026 - Python
EasyBuild is a software installation framework in Python that allows you to install software in a structured and robust way.
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Aug 7, 2026 - Python
Tool that just makes your open source project better using LLM agents
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Aug 8, 2026 - Python
A python package for processing eye movement data
python scientific-visualization scientific-computing eye-tracking event-detection eyetracking scientific-software
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Aug 7, 2026 - Python
python package for DFA (Detrended Fluctuation Analysis) and related algorithms
python multifractal-analysis dfa scientific-software detrended-fluctuation-analysis dcca mfdfa hurst-exponent multifractal-spectrum multifractal-detrended-fluctuation
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Jan 2, 2025 - Cython
Collection of easyblocks that implement support for building and installing software with EasyBuild.
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Aug 7, 2026 - Python
BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customization, rich visualization capabilities, and a platform for collaboration in neuroscience research.
open-source data-science machine-learning deep-learning reproducible-research matlab neuroscience data-visualization toolbox computational-neuroscience graph-theory data-analysis neuroimaging network-analysis connectomics biomedical-engineering scientific-software research-tools brain-connectivity-analysis brain-research
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Jul 1, 2026 - MATLAB
The Database Infrastructure for Mass Spectrometry (DIMSpec) project
nist r database sqlite3 mass-spectrometry scientific-research scientific-software nist-database shiny-r plumber-api pfas
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Jun 27, 2025 - R
A modular shared-memory high-performance framework for multiscale cardiac multiphysics simulations.
hpc electrophysiology cardiac-dynamics fsi scientific-software multiphysics-simulation electromechanics computational-cardiology
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Aug 7, 2026 - Julia
Howto and implementation documentation
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Jul 10, 2026 - C++
A program for real-time Reflection High Energy Electron Diffraction (RHEED) analysis.
camera livestream signal-processing pyqt5 image-processing threading user-interface plotting fft pyqtgraph scientific-software live-plotting rfft rheed
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Feb 11, 2026 - Python
Python package for temporal evolution of initial conditions under the generalized Lugiato-Lefever equation
python computational-physics partial-differential-equations scientific-software pseudospectral-methods lugiato-lefever-equation
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Sep 22, 2022 - Python
Collection of my network covert channel tools.
compression network-forensics network-science steganography infosec secret-sharing warden network-analysis information-security covert-channel information-hiding compression-algorithm network-security scientific-software network-steganography network-traffic-generator protocol-channels protocol-hopping protocol-switching-covert-channels protocol-hopping-covert-channels
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Jun 3, 2026 - C
This repository contains all community documentation for contributing to our open-source projects, including guidelines, workflows, and resources to help new and returning contributors collaborate effectively in support of open science and reproducible research.
open-source community documentation reproducible-research collaboration open-science onboarding guidelines contributing governance research-infrastructure maintainers scientific-software research-software inclusive-community
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May 29, 2025
AnnNet (Annotated Network) is a unified, high-expressivity graph platform designed to bring the convenience of AnnData-style annotated containers to networks, multilayer structures, and hypergraphs.
python graph systems-biology annotations computational-biology interoperability scientific-computing network-analysis graph-data sparse-matrix hypergraph multilayer-networks networks-biology graph-datastructures scientific-software
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Aug 8, 2026 - Python
FreeClimber is a background-subtracting particle detection platform designed to quantify group climbing performance in a Drosophila negative geotaxis (climbing) assay
python3 drosophila locomotion climbing background-subtraction animal-behavior animal-movement scientific-research scientific-software flies particle-detection drosophila-behaviour local-linear-regression rapid-iterative-negative-geotaxis
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May 8, 2026 - Python
Extract linked metadata from repositories
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Aug 5, 2026 - Python
PETLS: Persistent Topological Laplacian Software
data-science topology algebraic-topology persistent-homology topological-data-analysis scientific-software geometric-deep-learning topological-deep-learning hodge-laplacian persistent-laplacian
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Aug 18, 2025 - C++
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