This repository contains material to construct pangenome graphs for a small bacteria dataset detailing every step in the Nesi environment.

Long-read assembly workshop

Intermediate-Advanced shell for Bioinformatics

A workshop to get you started with automating your data analysis work in a High Performance Computing environment

Intermediate R workshop material

Introduction to R

A workshop to help you integrate Nextflow in your analysis workflows for reproducible and scalable pipelines.

A two day workshop on reproducibility with Git and Quarto

Outlier analysis workshop and research project developed under the AES ERC Networking Grant Scheme.

introduction to shell

Visualisation is more than just the code used to make a plot.

Training workshop for microbial genome assembly using short sequencing reads.

Introduction to Software containerisation and some of the container platforms such as Apptainer , Docker

A workflow for analysing RNA-seq data, aimed at new users who want to understand the methods available.