3dunet

3DUNet implemented with pytorch

A pytorch implementation of 3D UNet for 3D MRI Segmentation.

A complete pipeline for BraTS 2020

Pytorch implementation of Multichannel input pixelwise regression u-nets for medical image estimation with 3 applications in magnetic resonance imaging

A pipeline for processing and analysis of light-sheet microscopy images.

Tumor Doc: Brain tumor segmention using Deep Learning Method 1

Brain Tumor Segmentation using 3D U-Net (Computer Vision Project) (2022)

Segmentation of a small target (cancer) in a large image

TAG-SPARK: TAG-lens-based SPAtial redundancy-driven noise Reduction Kernel

Deep Learning with CNNs course project

SVRTK packaged as a MONAI Application Package (MAP), including for deployment on AIDE

Brain Tumor Segmentation with 3D UNET

This repository contains an implementation of a 3D U-Net architecture designed for volumetric (3D) medical image segmentation tasks. The model is especially effective for segmenting anatomical structures in datasets like CT or MRI scans.

Video diffusion model for generating MNIST digit animations on a consumer GPU. Implemented from scratch with PyTorch.

Multi-task deep learning pipeline that segments spine CT scans into 18 vertebra levels (Swin UNETR) and classifies each detected vertebra for metastatic lesion type (Normal/Lytic/Blastic/Mixed) using a 3D CNN — trained on TCIA's Spine-Mets-CT-SEG dataset.

Coordinate agents, channels, and mini-apps locally with Dune, a workspace that manages tasks, sandboxes, and runtime state in one interface.