add gene scoring test for zebrafish and c_elegans

theislab · Jan 10, 2025 · 291b18d · 291b18d
1 parent 444bc6d
commit 291b18d
Showing 1 changed file with 6 additions and 7 deletions.
diff --git a/tests/preprocessing/test_gene_scoring.py b/tests/preprocessing/test_gene_scoring.py
@@ -27,10 +27,9 @@ def test_human(adata_paul15):
         )
 
 
-def test_zebrafish(adata_paul15):
-    with pytest.raises(AssertionError):
-        scib.pp.score_cell_cycle(
-            adata_paul15,
-            organism="zebrafish",
-        )
-    # TODO
+@pytest.mark.parametrize("adata_from_url", ["c_elegans", "zebrafish"], indirect=True)
+def test_organism(adata_from_url):
+    scib.pp.score_cell_cycle(
+        adata_from_url,
+        organism=adata_from_url.uns["dataset_name"],
+    )