Issues · smorabit/hdWGCNA · GitHub

Labels Milestones New issue

Question about donor pseudobulks and donor-level ME values

#419

· svashishtphd opened

on Apr 16, 2026

Error: package ‘enrichR’ could not be loaded

#418

· aboutfanfan opened

on Apr 13, 2026

Should reassign_modules be set to TRUE or FALSE in ModuleConnectivity() for pseudobulk hdWGCNA?

#417

· pengjiao opened

on Apr 1, 2026

Question about MetacellsByGroups

#416

· bprager5 opened

on Mar 18, 2026

Clarification on the biological interpretation of Module Eigengene (ME) values in signed networks

#415

· crazyxiaoj opened

on Mar 18, 2026

Question about restricting gradient ranges in feature plot

#413

· filonico opened

on Jan 28, 2026

selection of genes for the analysis

#412

· OlgaLanzetta opened

on Jan 28, 2026

Error in : 'cb.cv.predict' is not an exported object from 'namespace:xgboost'

#411

· Sububioinfo opened

on Jan 9, 2026

ModuleTraitCorrelation stops with error: 'group.by variable must be a factor in the seurat object metadata.'

#410

· jopeptid opened

on Jan 8, 2026

Including lncRNAs with low expression levels in the analysis

#407

· PauIrastorza opened

on Dec 9, 2025

ProjectModules not flexible to user-defined modules

#406

· zvittorio opened

on Dec 5, 2025

Error in HubGeneNetworkPlot()

#402

· chent5 opened

on Nov 11, 2025