LD-PGTA

This release of LD-PGTA introduces a new format for the reference panels, which gives improved performance.

LD-PGTA

Minor improvements and bug fixes.

LD-PGTA

Minor improvements and bug fixes.

LD-PGTA

Minor improvements and bug fixes.

LD-PGTA

--- Added support to distant admixture between any number of populations.
--- Added a module to generate a test reference panel as well as a test sample.
--- Fixed bugs related to argument parsing in ANEUPLOIDY_TEST.
--- Reference panels can be created via cyvcf2, bcftools and pysam. The best performance are achieved with cyvcf2.
--- Now supports Python 3.9 and above.

LD-PGTA

Using the terminology recent-admixtures instead of F1-admixtures.

LD-PGTA

Slight improvement for sequences with a depth of coverage above 0.1x.

LD-PGTA

The reference panels are now encoded as binary files for efficient storage and retrieval.

LD-PGTA

Added support for complex admixtures.

LD-PGTA

Minor improvements and bug fixes.