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@satijalab

satijalab

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  1. seurat Public

    R toolkit for single cell genomics

    R 2.4k 942

  2. azimuth Public

    A Shiny web app for mapping datasets using Seurat v4

    HTML 122 33

  3. seurat-wrappers Public

    Community-provided extensions to Seurat

    R 328 135

  4. seurat-data Public

    Dataset distribution for Seurat

    R 136 46

Repositories

Showing 10 of 21 repositories
  • seurat Public

    R toolkit for single cell genomics

    R 2,413 942 422 27 Updated Apr 7, 2025
  • seurat-object Public
    R 26 29 44 10 Updated Mar 21, 2025
  • seurat-data Public

    Dataset distribution for Seurat

    R 136 GPL-3.0 46 36 1 Updated Mar 7, 2025
  • Mixscale Public
    R 16 1 13 0 Updated Feb 19, 2025
  • satijalab.r-universe.dev Public
    0 0 0 0 Updated Jan 7, 2025
  • sctransform Public

    R package for modeling single cell UMI expression data using regularized negative binomial regression

    R 221 GPL-3.0 35 45 0 Updated Dec 19, 2024
  • seurat-docker Public

    Docker images of Seurat

    Dockerfile 8 8 3 0 Updated Dec 9, 2024
  • seurat-wrappers Public

    Community-provided extensions to Seurat

    R 328 GPL-3.0 135 88 14 Updated Nov 22, 2024
  • azimuth_website Public
    HTML 1 1 0 1 Updated Nov 6, 2024
  • azimuth-references Public
    R 22 11 11 2 Updated Nov 5, 2024
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