GitHub - saejeong91/cshlcourse: CSHL Statistical Analysis of Genome Scale Data 2024

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CSHL Statistical Analysis of Genome Scale Data 2024

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Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
.github		.github
Figures		Figures
images		images
.Rbuildignore		.Rbuildignore
.gitignore		.gitignore
01_SummarizedExperiment.R		01_SummarizedExperiment.R
01_SummarizedExperiment.Rmd		01_SummarizedExperiment.Rmd
01_build_sce.R		01_build_sce.R
02_iSEE.R		02_iSEE.R
02_iSEE.Rmd		02_iSEE.Rmd
03_recount3_intro.R		03_recount3_intro.R
03_recount3_intro.Rmd		03_recount3_intro.Rmd
04_DGE_analysis_overview.R		04_DGE_analysis_overview.R
04_DGE_analysis_overview.Rmd		04_DGE_analysis_overview.Rmd
05_DGE_with_limma_voom.R		05_DGE_with_limma_voom.R
05_DGE_with_limma_voom.Rmd		05_DGE_with_limma_voom.Rmd
06_ExploreModelMatrix.R		06_ExploreModelMatrix.R
06_ExploreModelMatrix.Rmd		06_ExploreModelMatrix.Rmd
07_model_variable_selection.R		07_model_variable_selection.R
07_model_variable_selection.Rmd		07_model_variable_selection.Rmd
08_DEG_exercise.R		08_DEG_exercise.R
08_DEG_exercise.Rmd		08_DEG_exercise.Rmd
09_research_talks.R		09_research_talks.R
09_research_talks.Rmd		09_research_talks.Rmd
10_biocthis_intro.R		10_biocthis_intro.R
10_biocthis_intro.Rmd		10_biocthis_intro.Rmd
11_scRNAseq_overview.R		11_scRNAseq_overview.R
11_scRNAseq_overview.Rmd		11_scRNAseq_overview.Rmd
12_spatial_transcriptomics.R		12_spatial_transcriptomics.R
12_spatial_transcriptomics.Rmd		12_spatial_transcriptomics.Rmd
13_spatialLIBD_spatial_registration.R		13_spatialLIBD_spatial_registration.R
13_spatialLIBD_spatial_registration.Rmd		13_spatialLIBD_spatial_registration.Rmd
14_postcards.R		14_postcards.R
14_postcards.Rmd		14_postcards.Rmd
15_final_r_sessioninfo.R		15_final_r_sessioninfo.R
15_final_r_sessioninfo.Rmd		15_final_r_sessioninfo.Rmd
DESCRIPTION		DESCRIPTION
Install_packages.R		Install_packages.R
NAMESPACE		NAMESPACE
cshl_rstats_genome_scale_2024.Rproj		cshl_rstats_genome_scale_2024.Rproj
icon_192.png		icon_192.png
icon_32.png		icon_32.png
index.R		index.R
index.Rmd		index.Rmd
map_and_ga.html		map_and_ga.html
renumber-chapters.R		renumber-chapters.R
style.css		style.css
tangle.R		tangle.R