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12 changes: 6 additions & 6 deletions _modules/index.html
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<article class="bd-article">

<h1>All modules for which code is available</h1>
<ul><li><a href="relife/distributions.html">relife.distributions</a></li>
<li><a href="relife/likelihoods.html">relife.likelihoods</a></li>
<li><a href="relife/model/base.html">relife.model.base</a></li>
<li><a href="relife/model/nested.html">relife.model.nested</a></li>
<li><a href="relife/nonparametric.html">relife.nonparametric</a></li>
<ul><li><a href="relife/core/likelihoods.html">relife.core.likelihoods</a></li>
<li><a href="relife/core/model.html">relife.core.model</a></li>
<li><a href="relife/core/nested_model.html">relife.core.nested_model</a></li>
<li><a href="relife/models/distributions.html">relife.models.distributions</a></li>
<li><a href="relife/models/nonparametric.html">relife.models.nonparametric</a></li>
<li><a href="relife/models/regression.html">relife.models.regression</a></li>
<li><a href="relife/policies/age_replacement.html">relife.policies.age_replacement</a></li>
<li><a href="relife/policies/run_to_failure.html">relife.policies.run_to_failure</a></li>
<li><a href="relife/regression.html">relife.regression</a></li>
</ul>

</article>
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<h1>Source code for relife.likelihoods</h1><div class="highlight"><pre>
<h1>Source code for relife.core.likelihoods</h1><div class="highlight"><pre>
<span></span><span class="kn">from</span><span class="w"> </span><span class="nn">__future__</span><span class="w"> </span><span class="kn">import</span> <span class="n">annotations</span>

<span class="kn">from</span><span class="w"> </span><span class="nn">abc</span><span class="w"> </span><span class="kn">import</span> <span class="n">abstractmethod</span>
Expand All @@ -445,7 +445,7 @@ <h1>Source code for relife.likelihoods</h1><div class="highlight"><pre>
<span class="kn">from</span><span class="w"> </span><span class="nn">relife.data</span><span class="w"> </span><span class="kn">import</span> <span class="n">LifetimeData</span>

<span class="k">if</span> <span class="n">TYPE_CHECKING</span><span class="p">:</span> <span class="c1"># avoid circular imports due to typing</span>
<span class="kn">from</span><span class="w"> </span><span class="nn">relife.model</span><span class="w"> </span><span class="kn">import</span> <span class="n">ParametricLifetimeModel</span><span class="p">,</span> <span class="n">ParametricModel</span>
<span class="kn">from</span><span class="w"> </span><span class="nn">.model</span><span class="w"> </span><span class="kn">import</span> <span class="n">ParametricLifetimeModel</span><span class="p">,</span> <span class="n">ParametricModel</span>


<span class="k">class</span><span class="w"> </span><span class="nc">Likelihood</span><span class="p">(</span><span class="n">Protocol</span><span class="p">):</span>
Expand Down Expand Up @@ -499,15 +499,15 @@ <h1>Source code for relife.likelihoods</h1><div class="highlight"><pre>


<div class="viewcode-block" id="LikelihoodFromLifetimes">
<a class="viewcode-back" href="../../api/likelihood/relife.likelihoods.LikelihoodFromLifetimes.html#relife.likelihoods.LikelihoodFromLifetimes">[docs]</a>
<a class="viewcode-back" href="../../../api/likelihood/relife.core.likelihoods.LikelihoodFromLifetimes.html#relife.core.likelihoods.LikelihoodFromLifetimes">[docs]</a>
<span class="k">class</span><span class="w"> </span><span class="nc">LikelihoodFromLifetimes</span><span class="p">(</span><span class="n">Likelihood</span><span class="p">):</span>
<span class="w"> </span><span class="sd">&quot;&quot;&quot;</span>
<span class="sd"> Generic likelihood object for parametric lifetime models</span>

<span class="sd"> Parameters</span>
<span class="sd"> ----------</span>
<span class="sd"> model : ParametricLifetimeModel</span>
<span class="sd"> Underlying model used to compute probability functions</span>
<span class="sd"> Underlying core used to compute probability functions</span>
<span class="sd"> lifetime_data : LifetimeData</span>
<span class="sd"> Observed lifetime data used one which the likelihood is evaluated</span>
<span class="sd"> model_args : tuple of zero or more ndarray, default is ()</span>
Expand All @@ -520,7 +520,7 @@ <h1>Source code for relife.likelihoods</h1><div class="highlight"><pre>
<span class="n">lifetime_data</span><span class="p">:</span> <span class="n">LifetimeData</span><span class="p">,</span>
<span class="n">model_args</span><span class="p">:</span> <span class="nb">tuple</span><span class="p">[</span><span class="n">NDArray</span><span class="p">[</span><span class="n">np</span><span class="o">.</span><span class="n">float64</span><span class="p">],</span> <span class="o">...</span><span class="p">]</span> <span class="o">=</span> <span class="p">(),</span>
<span class="p">):</span>
<span class="bp">self</span><span class="o">.</span><span class="n">model</span> <span class="o">=</span> <span class="n">model</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span> <span class="c1"># a copy is made as likelihood modifies model.params</span>
<span class="bp">self</span><span class="o">.</span><span class="n">model</span> <span class="o">=</span> <span class="n">model</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span> <span class="c1"># a copy is made as likelihood modifies core.params</span>
<span class="bp">self</span><span class="o">.</span><span class="n">lifetime_data</span> <span class="o">=</span> <span class="n">lifetime_data</span>
<span class="bp">self</span><span class="o">.</span><span class="n">model_args</span> <span class="o">=</span> <span class="n">model_args</span>

Expand Down Expand Up @@ -636,7 +636,7 @@ <h1>Source code for relife.likelihoods</h1><div class="highlight"><pre>
<span class="p">)</span>

<div class="viewcode-block" id="LikelihoodFromLifetimes.negative_log">
<a class="viewcode-back" href="../../api/likelihood/relife.likelihoods.LikelihoodFromLifetimes.html#relife.likelihoods.LikelihoodFromLifetimes.negative_log">[docs]</a>
<a class="viewcode-back" href="../../../api/likelihood/relife.core.likelihoods.LikelihoodFromLifetimes.html#relife.core.likelihoods.LikelihoodFromLifetimes.negative_log">[docs]</a>
<span class="k">def</span><span class="w"> </span><span class="nf">negative_log</span><span class="p">(</span>
<span class="bp">self</span><span class="p">,</span>
<span class="n">params</span><span class="p">:</span> <span class="n">NDArray</span><span class="p">[</span><span class="n">np</span><span class="o">.</span><span class="n">float64</span><span class="p">],</span>
Expand All @@ -651,7 +651,7 @@ <h1>Source code for relife.likelihoods</h1><div class="highlight"><pre>


<div class="viewcode-block" id="LikelihoodFromLifetimes.jac_negative_log">
<a class="viewcode-back" href="../../api/likelihood/relife.likelihoods.LikelihoodFromLifetimes.html#relife.likelihoods.LikelihoodFromLifetimes.jac_negative_log">[docs]</a>
<a class="viewcode-back" href="../../../api/likelihood/relife.core.likelihoods.LikelihoodFromLifetimes.html#relife.core.likelihoods.LikelihoodFromLifetimes.jac_negative_log">[docs]</a>
<span class="nd">@override</span>
<span class="k">def</span><span class="w"> </span><span class="nf">jac_negative_log</span><span class="p">(</span>
<span class="bp">self</span><span class="p">,</span>
Expand Down Expand Up @@ -759,8 +759,8 @@ <h1>Source code for relife.likelihoods</h1><div class="highlight"><pre>
</div>

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