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@cytomining @WayScience

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roshankern/README.md

Hi there 👋

My name is Roshan. I graduated Case Western Reserve University in 2024 with a B.S. in Systems Biology.

  • 🔭 I’m currently developing Brieflow, a tool for processing optical pooled screen data, at the Cheeseman Lab (Whitehead Institute, MIT).
  • 🌱 I’m currently learning about data science and its applications to cell biology.
  • 📫 How to reach me:

Popular repositories Loading

  1. mitocheck_data mitocheck_data Public

    Forked from WayScience/mitocheck_data

    All information regarding the download and processing of Mitocheck data from IDR study with accession idr0013 (screenA).

    Jupyter Notebook

  2. pycytominer pycytominer Public

    Forked from cytomining/pycytominer

    cytominer python package

    Python

  3. cell-health-data cell-health-data Public

    Forked from WayScience/cell-health-data

    Data processing for the Cell Painting data from the Cell Health experiments

    Jupyter Notebook

  4. IDR_stream IDR_stream Public

    Forked from WayScience/IDR_stream

    Software for feature extraction from IDR image data

    Jupyter Notebook

  5. phenotypic_profiling_model phenotypic_profiling_model Public

    Forked from WayScience/phenotypic_profiling

    Training and validating ML model using data from https://github.com/WayScience/mitocheck_data

    Jupyter Notebook

  6. Video-Creation-Tool Video-Creation-Tool Public

    Forked from lavanv11/Video-Creation-Tool

    Python

354 contributions in the last year

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Contribution activity

April 2025

Created a pull request in cheeseman-lab/brieflow-analysis that received 13 comments

Aggregate overhaul

Overhaul of aggregate (for new TVN norm) and cluster (for new evaluation)

+665 −445 lines changed 13 comments
Opened 11 other pull requests in 2 repositories
Reviewed 9 pull requests in 2 repositories
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