QBiC (qbic-pipelines)
Bioinformatics analysis pipelines at QBiC
- 17 followers
- University of Tübingen
- https://qbic.life
- support@qbic.zendesk.com
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root-tissue-analysis
root-tissue-analysis PublicPipeline for pH analysis of A. thaliana root tissue
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icgc-featurecounts
icgc-featurecounts PublicForked from apeltzer/IGCG-featureCounts
A Nextflow pipeline to run featureCounts on RNAseq BAM files on ICGC in AWS/AWS Batch
Repositories
Showing 10 of 30 repositories
- sarek_optimized_co2 Public Forked from nf-core/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
qbic-pipelines/sarek_optimized_co2’s past year of commit activity - neuromriprep Public
qbic-pipelines/neuromriprep’s past year of commit activity - 3D-bioimage-segmentator Public
qbic-pipelines/3D-bioimage-segmentator’s past year of commit activity - variantconsensus Public
qbic-pipelines/variantconsensus’s past year of commit activity - metagenomeannotation Public
nextflow pipeline for metagenome annotation in chunks with Bakta or Prokka
qbic-pipelines/metagenomeannotation’s past year of commit activity - vcftocounts Public
Nextflow pipeline to transform (g)VCF files to matrices for statistical analysis.
qbic-pipelines/vcftocounts’s past year of commit activity
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