Adds a gene-based mt filtering script #734
Merged
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Johnnyassaf
reviewed
Jul 23, 2025
Johnnyassaf
requested changes
Jul 23, 2025
Contributor
Johnnyassaf
left a comment
Johnnyassaf
left a comment
There was a problem hiding this comment.
Check out the comment on line 62, change the order of the parentheses to avoid a possible bug
Johnnyassaf
reviewed
Jul 23, 2025
Co-authored-by: Johnnyassaf <[email protected]>
Johnnyassaf
reviewed
Jul 23, 2025
Johnnyassaf
approved these changes
Jul 23, 2025
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Adds a quick script based on the existing MatrixTable subsetting process. This generates a subset of a given MT path, based on a list of ENSG gene IDs provided as CLI arguments