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Use 3 columns instead of 4
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lauraluebbert authored Jan 19, 2025
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Expand Up @@ -28,33 +28,37 @@ These are the `gget` core modules. Click on any module to access detailed docume

<table style="width:100%; table-layout:fixed;">
<tr>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/alphafold.md"><strong>gget alphafold</strong></a><br>Predict 3D protein structure from an amino acid sequence.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/archs4.md"><strong>gget archs4</strong></a><br>What is the expression of my gene in tissue X?</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/bgee.md"><strong>gget bgee</strong></a><br>Find all orthologs of a gene.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/blast.md"><strong>gget blast</strong></a><br>BLAST a nucleotide or amino acid sequence.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/alphafold.md"><strong>gget alphafold</strong></a><br>Predict 3D protein structure from an amino acid sequence.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/archs4.md"><strong>gget archs4</strong></a><br>What is the expression of my gene in tissue X?</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/bgee.md"><strong>gget bgee</strong></a><br>Find all orthologs of a gene.</td>
</tr>
<tr>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/blat.md"><strong>gget blat</strong></a><br>Find the genomic location of a nucleotide or amino acid sequence.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/cbio.md"><strong>gget cbio</strong></a><br>Explore a gene's expression in the specified cancers.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/cellxgene.md"><strong>gget cellxgene</strong></a><br>Get ready-to-use single-cell RNA seq count matrices from certain tissues/ diseases/ etc.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/cosmic.md"><strong>gget cosmic</strong></a><br>Search for genes, mutations, and other factors associated with certain cancers.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/blast.md"><strong>gget blast</strong></a><br>BLAST a nucleotide or amino acid sequence.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/blat.md"><strong>gget blat</strong></a><br>Find the genomic location of a nucleotide or amino acid sequence.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/cbio.md"><strong>gget cbio</strong></a><br>Explore a gene's expression in the specified cancers.</td>
</tr>
<tr>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/diamond.md"><strong>gget diamond</strong></a><br>Align amino acid sequences to a reference.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/elm.md"><strong>gget elm</strong></a><br>Find protein interaction domains and functions in an amino acid sequence.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/enrichr.md"><strong>gget enrichr</strong></a><br>Check if a list of genes is associated with a specific celltype/ pathway/ disease/ etc.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/info.md"><strong>gget info</strong></a><br>Fetch all of the information associated with an Ensembl ID.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/cellxgene.md"><strong>gget cellxgene</strong></a><br>Get ready-to-use single-cell RNA seq count matrices from certain tissues/ diseases/ etc.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/cosmic.md"><strong>gget cosmic</strong></a><br>Search for genes, mutations, and other factors associated with certain cancers.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/diamond.md"><strong>gget diamond</strong></a><br>Align amino acid sequences to a reference.</td>
</tr>
<tr>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/muscle.md"><strong>gget muscle</strong></a><br>Align multiple nucleotide or amino acid sequences to each other.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/mutate.md"><strong>gget mutate</strong></a><br>Mutate nucleotide sequences based on specified mutations.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/opentargets.md"><strong>gget opentargets</strong></a><br>Explore which diseases and drugs a gene is associated with.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/pdb.md"><strong>gget pdb</strong></a><br>Fetch data from the Protein Data Bank (PDB) based on a PDB ID.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/elm.md"><strong>gget elm</strong></a><br>Find protein interaction domains and functions in an amino acid sequence.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/enrichr.md"><strong>gget enrichr</strong></a><br>Check if a list of genes is associated with a specific celltype/ pathway/ disease/ etc.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/info.md"><strong>gget info</strong></a><br>Fetch all of the information associated with an Ensembl ID.</td>
</tr>
<tr>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/ref.md"><strong>gget ref</strong></a><br>Get reference genomes from Ensembl.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/search.md"><strong>gget search</strong></a><br>Find Ensembl IDs associated with the specified search word.</td>
<td style="width:25%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/seq.md"><strong>gget seq</strong></a><br>Fetch the nucleotide or amino acid sequence of a gene.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/muscle.md"><strong>gget muscle</strong></a><br>Align multiple nucleotide or amino acid sequences to each other.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/mutate.md"><strong>gget mutate</strong></a><br>Mutate nucleotide sequences based on specified mutations.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/opentargets.md"><strong>gget opentargets</strong></a><br>Explore which diseases and drugs a gene is associated with.</td>
</tr>
<tr>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/pdb.md"><strong>gget pdb</strong></a><br>Fetch data from the Protein Data Bank (PDB) based on a PDB ID.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/ref.md"><strong>gget ref</strong></a><br>Get reference genomes from Ensembl.</td>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/search.md"><strong>gget search</strong></a><br>Find Ensembl IDs associated with the specified search word.</td>
</tr>
<tr>
<td style="width:33.33%; padding:20px; text-align:center; vertical-align:top;"><a href="/gget/en/seq.md"><strong>gget seq</strong></a><br>Fetch the nucleotide or amino acid sequence of a gene.</td>
</tr>
</table>

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