Change returned motif start and end positions to int

pachterlab · Jan 8, 2024 · 5e1bf3c · 5e1bf3c
1 parent c3cfad4
commit 5e1bf3c
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/gget/gget_elm.py b/gget/gget_elm.py
@@ -185,8 +185,8 @@ def regex_match(sequence):
             )
 
             (start, end) = match_string.span(1)
-            elm_row.insert(loc=2, column="motif_start_in_query", value=str(start + 1))
-            elm_row.insert(loc=3, column="motif_end_in_query", value=str(end))
+            elm_row.insert(loc=2, column="motif_start_in_query", value=int(start + 1))
+            elm_row.insert(loc=3, column="motif_end_in_query", value=int(end))
 
             elm_identifier = [str(x) for x in elm_row["ELMIdentifier"]][0]