Skip to content

Commit

Permalink
Uniprot ID to Acc
Browse files Browse the repository at this point in the history
  • Loading branch information
choang20 committed Jan 7, 2024
1 parent b1fe030 commit 4ab4e69
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions gget/main.py
Original file line number Diff line number Diff line change
Expand Up @@ -295,23 +295,23 @@ def main():
help="DEPRECATED - json is now the default output format (convert to csv using flag [--csv]).",
)
## gget elm subparser
elm_desc = "Locally predicts Eukaryotic Linear Motifs from an amino acid sequence or UniProt ID using data from the ELM database (http://elm.eu.org/media/Elm_academic_license.pdf)."
elm_desc = "Locally predicts Eukaryotic Linear Motifs from an amino acid sequence or UniProt Acc using data from the ELM database (http://elm.eu.org/media/Elm_academic_license.pdf)."
parser_elm = parent_subparsers.add_parser(
"elm", parents=[parent], description=elm_desc, help=elm_desc, add_help=True
)
# elm parser arguments
parser_elm.add_argument(
"sequence",
type=str,
help="Amino acid sequence or Uniprot ID. If Uniprot ID, use flag '--uniprot'.",
help="Amino acid sequence or Uniprot Acc. If Uniprot Acc, use flag '--uniprot'.",
)
parser_elm.add_argument(
"-u",
"--uniprot",
default=False,
action="store_true",
required=False,
help="Use this flag if input is a Uniprot ID instead of an amino acid sequence.",
help="Use this flag if input is a Uniprot Acc instead of an amino acid sequence.",
)
parser_elm.add_argument(
"-s",
Expand Down

0 comments on commit 4ab4e69

Please sign in to comment.