Repositories list

• limelight-core

  Public
  Limelight Core (webapp, importer, run importer, submit import)

  TypeScript

  •

  Apache License 2.0

  •22 forks•66 stars•11 issue•99 pull requests•Updated Apr 21, 2026Apr 21, 2026

• proxl-web-app

  Public
  ProXL Web App -- Visualize and Share Protein Cross-linking Data

  Java

  •

  Apache License 2.0

  •44 forks•1313 stars•00 issues•1515 pull requests•Updated Feb 23, 2026Feb 23, 2026

• proxl-import-xlinkx

  Public
  Convert the results of a Thermo Proteome Discoverer XlinkX cross-linking search to Proxl XML suitable for import into Proxl.

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• proxl-import-xquest

  Public
  Convert XQuest output to Proxl XML

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•11 issue•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• proxl-import-metamorpheus

  Public
  Convert MetaMorpheus cross-linking search results to proxl XML suitable for import into proxl.

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•22 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• proxl-import-byonic

  Public
  Convert Byonic results to Proxl XML

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• proxl-import-kojak-tpp

  Public
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• proxl-import-merox

  Public
  Convert results of a MeroX analysis to proxl XML for import into proxl.

  Java

  •

  Apache License 2.0

  •00 forks•22 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-cometptm-tpp

  Public
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-cometptm

  Public
  Import Comet PTM results into limelight. Assumes no post processing was done.

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-taggraph

  Public
  Convert TagGraph results into Limelight XML for import into Limelight

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-moda

  Public
  Convert the results of a modA search to limelight XML for import into limelight

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-magnum-percolator

  Public
  Convert the output of Magnum + Percolator to limelight XML

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-crux-tide-percolator

  Public
  Convert output of a Crux Tide + Percolator search to limelight XML suitable for import into limelight.

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•11 issue•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-crux-comet-percolator

  Public
  Convert the output of the Crux pipeline to Limelight XML suitable for import into Limelight.

  Java

  •

  Apache License 2.0

  •11 fork•11 star•11 issue•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-conga

  Public
  Convert CONGA output to Limelight XML

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-comet-tpp

  Public
  Convert results from a comet search to Limelight XML suitable for import into Limelight.

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-comet-percolator

  Public
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-casanovo

  Public
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-comet-mzid

  Public
  Convert comet results in a mzIdentML file into Limelight XML for import into Limelight

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-magnum-tpp

  Public
  Create limelight XML from magnum + TPP output.

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-msfragger-tpp

  Public
  Create limelight XML files from the output of msfragger open modification search post processed with TPP

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-metamorpheus

  Public
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-philosopher-tsv

  Public
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-msfragger-tsv

  Public
  Convert the native TSV output of MSFragger to Limelight XML, suitable for import into limelight.

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•11 issue•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-prolucid-dtaselect

  Public
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-open-pfind

  Public
  Convert output of Open pFind to Limelight XML, suitable for import into Limelight.

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• limelight-import-api

  Public
  Files and documentation related to importing data into limelight.

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 12, 2025Aug 12, 2025

• proxl-import-api

  Public
  API for building importers into ProXL that simplify creation of ProXL XML documents.

  HTML

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 16, 2025Jun 16, 2025

• Spectral_Storage_Service

  Public
  Storage of Spectra

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 4, 2024Nov 4, 2024