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    7 repositories

    • wfmash

      Public
      base-accurate DNA sequence alignments using WFA and mashmap3
      C++
      •
      MIT License
      •25•214•35•17•Updated Mar 20, 2026Mar 20, 2026

    • faigz-rs

      Public
      fully reentrant faigz reader rust wrapper
      Rust
      •
      MIT License
      •0•0•0•0•Updated Oct 26, 2025Oct 26, 2025

    • pafchainer

      Public
      A tool for merging WFMASH's alignment chains using the WFA algorithm.
      Rust
      •
      MIT License
      •0•7•1•0•Updated Sep 2, 2025Sep 2, 2025

    • faigz

      Public
      reentrant, thread-safe but non-rendudant .fai .gzi FASTA/BGZF index
      C
      •
      MIT License
      •0•1•1•0•Updated Jul 18, 2025Jul 18, 2025

    • allwave

      Public
      simple interface for all-way alignment with biWFA
      0•0•0•0•Updated Jul 11, 2025Jul 11, 2025

    • paflook

      Public
      PAF alignment statistics
      Rust
      •0•6•0•0•Updated May 27, 2025May 27, 2025

    • wfmash-paper

      Public
      TeX
      •
      MIT License
      •1•3•0•0•Updated Aug 15, 2024Aug 15, 2024
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