Repositories list

• phycorr

  Public
  Physiological noise correction pipeline for fMRI data, employing: R-DECO for the extraction of peak heart rate and respiration rate; and a modified RETROICOR to generate physiological noise regressors for BOLD signal correction.

  MATLAB

  •0•2•0•0•Updated Apr 28, 2025Apr 28, 2025

• prism

  Public
  Pipeline for Reproducible Imaging Standardization and Management: This repository provides a pipeline for neuroimaging data processing, converting DICOM to NIfTI using Heudiconv and then preprocessing the NIfTI files with fMRIPrep through Singularity.

  Shell

  •0•1•0•0•Updated Apr 1, 2025Apr 1, 2025

• pemas

  Public
  This repository contains code and data analysis pipelines for investigating the neural correlates of Respiratory-gated Auricular Vagal Afferent Nerve Stimulation (RAVANS) using 7T fMRI. Includes preprocessing, physiological noise regression, and statistical analysis scripts.

  Shell

  •0•1•0•0•Updated Apr 1, 2025Apr 1, 2025

• .github

  Public
  The laboratory uses cutting-edge dual PET-MRI neuroimaging to measure neuroinflammation (operationalized as neuroimmune glial cell activation) in Long COVID and ME/CFS study participants

  0•0•0•0•Updated Mar 27, 2025Mar 27, 2025