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    26 repositories

    • spine_7t_fmri_1mm_vs_3mm

      Public
      Code for processing and analyzing spinal cord fMRI data acquired at 7 T. Analysis applied to different slice thickness.
      Python
      •
      MIT License
      •0•0•10•0•Updated Oct 17, 2026Oct 17, 2026

    • shimming-toolbox

      Public
      Code for performing static, dynamic and real-time shimming using external and internal MRI shim coils
      fsl
      fsl
      Python
      •
      GNU General Public License v3.0
      •14•48•46•2•Updated Oct 15, 2026Oct 15, 2026

    • siemens-fire

      Public
      Code for running Shimming Toolbox using FIRE on Siemens MRI scanners
      Python
      •
      GNU General Public License v3.0
      •0•2•23•3•Updated Oct 15, 2026Oct 15, 2026

    • b0-fieldmap-realistic-simulation

      Public
      Optimization of shim coil layout placement using simulated B0 and B1 maps constructed from segmented MRI scans of the head and full spine region. This is a coll…
      Python
      •
      MIT License
      •0•3•15•1•Updated Oct 6, 2026Oct 6, 2026

    • mrd2nii

      Public
      ISMRMRD to NIfTI conversion
      Python
      •
      GNU General Public License v3.0
      •0•3•5•0•Updated Sep 28, 2026Sep 28, 2026

    • susceptibility-to-fieldmap-fft

      Public
      Fourier based method to estimate B0 variation induced by a susceptibility distribution.
      Python
      •
      GNU General Public License v3.0
      •0•4•12•0•Updated Sep 14, 2026Sep 14, 2026

    • CST-simulation-macros

      Public
      Repository to store various macros useful for CST simulations
      MAXScript
      •1•1•2•0•Updated Jun 26, 2026Jun 26, 2026

    • tissue-to-MRproperty

      Public
      Assign magnetic resonance property values to segmented anatomy
      Python
      •
      GNU General Public License v3.0
      •1•7•11•2•Updated Jun 2, 2026Jun 2, 2026

    • data-testing

      Public
      Light dataset for testing and tutorials
      1•1•1•0•Updated Feb 16, 2026Feb 16, 2026

    • python-ismrmrd-server

      Public
      Example client/server example for the streaming ISMRM Raw Data protocol
      Jupyter Notebook
      •
      MIT License
      •68•0•0•0•Updated Aug 22, 2025Aug 22, 2025

    • binaries

      Public
      3rd party software that are used to test shimming-toolbox
      Other
      •0•0•1•0•Updated Jul 10, 2025Jul 10, 2025

    • spinalcord-signal-recovery

      Public
      Scripts for signal recovery analysis in the spinal cord
      Python
      •
      GNU General Public License v3.0
      •1•2•2•0•Updated Jun 6, 2025Jun 6, 2025

    • resppredict_arch

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 7, 2025Feb 7, 2025

    • data-dynamic-shimming

      Public
      Dataset to perform dynamic b0 shimming
      0•0•0•0•Updated Feb 5, 2025Feb 5, 2025

    • fsleyes-plugin-shimming-toolbox

      Public
      Fsleyes plugin for Shimming-Toolbox
      Python
      •
      GNU General Public License v3.0
      •2•0•10•0•Updated Jul 3, 2024Jul 3, 2024

    • rf-shimming-7t

      Public
      Repository for the paper "B1+ shimming in the cervical spinal cord at 7T"
      Jupyter Notebook
      •
      MIT License
      •1•4•16•0•Updated May 28, 2024May 28, 2024

    • rf-shimming-7t-neurolibre

      Public
      Jupyter Notebook
      •0•0•2•0•Updated Feb 7, 2024Feb 7, 2024

    • data-create-coil-profiles

      Public
      Dataset to create coil profiles
      Shell
      •0•0•0•0•Updated Sep 29, 2023Sep 29, 2023

    • doc-figures

      Public
      Repository that contains most figures for shimming-toolbox documentation.
      GNU General Public License v3.0
      •0•0•0•0•Updated May 31, 2023May 31, 2023

    • universal-pulse

      Public
      Various scripts to generate universal pulses for the spinal cord
      GNU General Public License v3.0
      •0•0•1•1•Updated Nov 4, 2022Nov 4, 2022

    • B1-shimming

      Public
      This repository contains a Jupyter Book that introduces the concept of B1+ shimming (A.K.A RF shimming).
      Jupyter Notebook
      •0•2•0•0•Updated Apr 7, 2022Apr 7, 2022

    • b1_dicoms_brain

      Public
      DICOMS files corresponding to a full brain B1+ mapping
      0•0•0•0•Updated Mar 19, 2022Mar 19, 2022

    • shimming-toolbox-matlab

      Public archive
      Code for performing real-time shimming using external MRI shim coils
      MATLAB
      •
      GNU General Public License v3.0
      •5•16•63•5•Updated Jan 14, 2021Jan 14, 2021

    • notebooks

      Public
      A collection of Jupyter Notebooks using the shimming toolbox.
      0•1•0•0•Updated Jul 5, 2020Jul 5, 2020

    • helpDocMd

      Public
      .m-file Documentor
      MATLAB
      •0•0•13•1•Updated Jul 3, 2020Jul 3, 2020

    • shimming-toolbox.org

      Public archive
      MATLAB
      •1•2•0•0•Updated Jun 18, 2020Jun 18, 2020
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