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    61 repositories

    • sequencescape

      Public
      Web based LIMS
      rubyrailssciencebiologylims
      Ruby
      •
      MIT License
      •34•108•123•15•Updated Feb 4, 2026Feb 4, 2026

    • limber

      Public
      A config-driven LIMS built on Sequencescape, primarily for running library preparation pipelines in the laboratory
      railsvuelimssequencescape-client-application
      Ruby
      •
      MIT License
      •8•5•72•20•Updated Feb 4, 2026Feb 4, 2026

    • traction-ui

      Public
      JavaScript
      •
      MIT License
      •6•2•30•9•Updated Feb 4, 2026Feb 4, 2026

    • stan-client

      Public
      Front-end code for the Spatial Genomics LIMS
      TypeScript
      •
      MIT License
      •0•1•26•15•Updated Feb 4, 2026Feb 4, 2026

    • lab-share-lib

      Public
      Python library to interact with lab-share framework
      Python
      •
      MIT License
      •0•0•1•4•Updated Feb 4, 2026Feb 4, 2026

    • gatekeeper

      Public
      Gatekeeper is used to track the production and validation of batches of tag plates for sequencing. It is designed to interface with the Sequencescape LIMS.
      rubyrails
      Ruby
      •
      MIT License
      •5•0•8•4•Updated Feb 3, 2026Feb 3, 2026

    • event_warehouse

      Public
      A simple message queue driven event store
      rubyrails
      Ruby
      •
      MIT License
      •4•0•5•8•Updated Feb 3, 2026Feb 3, 2026

    • unified_warehouse

      Public
      ruby
      Ruby
      •
      MIT License
      •8•2•6•10•Updated Feb 3, 2026Feb 3, 2026

    • labwhere

      Public
      A tool for tracking uniquely barcoded labware
      Ruby
      •
      MIT License
      •10•3•9•4•Updated Feb 3, 2026Feb 3, 2026

    • traction-service

      Public
      Ruby on Rails exposing a RESTful API for a Long Read LIMS
      Ruby
      •
      MIT License
      •5•5•13•2•Updated Feb 3, 2026Feb 3, 2026

    • print_my_barcode

      Public
      Barcode printing service
      HTML
      •5•2•3•1•Updated Feb 3, 2026Feb 3, 2026

    • quanthub

      Public
      Provides parsing and visualisation of the concentration information from qPCR and plate readers
      JavaScript
      •
      MIT License
      •4•2•2•1•Updated Feb 3, 2026Feb 3, 2026

    • General-Backlog-Items

      Public
      Broad bucket to collate backlog items that have no obvious repository
      0•0•95•0•Updated Feb 2, 2026Feb 2, 2026

    • baracoda

      Public
      Generate barcodes on demand
      Python
      •
      MIT License
      •1•0•8•10•Updated Feb 2, 2026Feb 2, 2026

    • warren

      Public
      Gem to handle rabbitMQ integrations
      Ruby
      •
      Other
      •0•1•1•9•Updated Jan 30, 2026Jan 30, 2026

    • stan-core

      Public
      Java
      •
      MIT License
      •2•0•7•0•Updated Jan 30, 2026Jan 30, 2026

    • asset_audits

      Public
      Add audits to assets in sequencescape
      rubyrails
      JavaScript
      •
      MIT License
      •7•3•4•10•Updated Jan 28, 2026Jan 28, 2026

    • tol-lab-share

      Public
      Rabbitmq consumer for TOL data input
      Python
      •
      MIT License
      •0•0•2•11•Updated Jan 27, 2026Jan 27, 2026

    • jsonapi-resources

      Public
      A resource-focused Rails library for developing JSON:API compliant servers.
      Ruby
      •
      MIT License
      •538•0•1•1•Updated Jan 26, 2026Jan 26, 2026

    • sprint

      Public
      Simple print service
      CSS
      •
      MIT License
      •0•0•0•11•Updated Jan 22, 2026Jan 22, 2026

    • record_loader

      Public
      Easily manage seeding and updating data from simple yml files
      Ruby
      •
      Other
      •1•0•0•10•Updated Jan 22, 2026Jan 22, 2026

    • sm_workflow_lims

      Public
      A small LIMS to assist with managing workflows
      rubyrails
      Ruby
      •
      MIT License
      •6•2•10•11•Updated Jan 21, 2026Jan 21, 2026

    • lighthouse

      Public
      API to search through data provided by Lighthouse Labs
      Python
      •
      MIT License
      •1•2•18•12•Updated Jan 9, 2026Jan 9, 2026

    • crawler

      Public
      Store sample data from Lighthouse labs
      Python
      •
      MIT License
      •3•4•24•13•Updated Dec 6, 2025Dec 6, 2025

    • .github

      Public
      Default community health files for Sanger
      0•0•0•1•Updated Dec 2, 2025Dec 2, 2025

    • lighthouse-ui-v3

      Public
      V3 front end for lighthouse API
      JavaScript
      •
      MIT License
      •0•0•2•17•Updated Nov 28, 2025Nov 28, 2025

    • wrangler

      Public
      A microservice to deal with tube racks
      Python
      •
      MIT License
      •2•0•2•13•Updated Oct 27, 2025Oct 27, 2025

    • janitor

      Public
      A Python application which hosts task scripts for data management and clean up tasks, running them on a schedule.
      Python
      •
      MIT License
      •0•0•1•11•Updated Oct 27, 2025Oct 27, 2025

    • cherrytrack

      Public
      Python
      •
      GNU General Public License v2.0
      •0•0•6•11•Updated Oct 27, 2025Oct 27, 2025

    • interrogator

      Public
      A custom interface to query Intergration Suite results via GitLab
      rubysinatra
      Ruby
      •
      MIT License
      •0•0•1•2•Updated Oct 10, 2025Oct 10, 2025