Repositories list

• bsseq

  Public
  Devel repository for bsseq

  R

  •29•39•65•7•Updated Jan 30, 2026Jan 30, 2026

• hansenlab.github.io

  Public
  GitHub Pages

  CSS

  •0•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• recount_genotype_paper

  Public
  R

  •1•2•0•0•Updated Apr 24, 2025Apr 24, 2025

• mNSF

  Public
  Python

  •

  GNU Lesser General Public License v3.0

  •1•6•2•0•Updated Apr 14, 2025Apr 14, 2025

• epigeneticmachinery

  Public
  HTML

  •

  MIT License

  •0•0•0•0•Updated Feb 22, 2025Feb 22, 2025

• mNSF_paper

  Public
  Analysis for the mNSF paper

  Python

  •

  GNU Lesser General Public License v3.0

  •0•1•0•1•Updated Nov 22, 2024Nov 22, 2024

• mpra

  Public

  hansenlab/mpra’s past year of commit activity
  R

  •5•6•1•1•Updated Sep 14, 2024Sep 14, 2024

• minfi

  Public
  Devel repository for minfi

  R

  •74•64•124•8•Updated Apr 30, 2024Apr 30, 2024

• fahrner_kabuki2

  Public
  R

  •0•0•0•0•Updated Apr 8, 2024Apr 8, 2024

• mdem_neuron_paper

  Public
  Code for analyses in the paper

  R

  •0•0•0•0•Updated Apr 6, 2024Apr 6, 2024

• yamss

  Public
  R

  •0•3•2•0•Updated Feb 29, 2024Feb 29, 2024

• bnbc

  Public
  R

  •0•2•3•0•Updated Jan 24, 2024Jan 24, 2024

• RecountGenotyper

  Public
  Genotype calling from Recount3 RNA-seq data.

  R

  •

  Other

  •0•1•3•0•Updated Jan 23, 2024Jan 23, 2024

• epigenetics_selection

  Public
  R

  •0•1•0•0•Updated Oct 8, 2023Oct 8, 2023

• RNAVelocityCode

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Aug 30, 2023Aug 30, 2023

• hansenlab

  Public
  0•0•0•0•Updated Jul 16, 2023Jul 16, 2023

• fahrner_weaver

  Public
  HTML

  •0•0•0•0•Updated Jun 24, 2023Jun 24, 2023

• IlluminaHumanMethylationEPIC2anno.ilm10a1.hg38

  Public
  0•2•0•0•Updated Apr 7, 2023Apr 7, 2023

• IlluminaHumanMethylationEPIC2manifest

  Public
  0•1•0•0•Updated Apr 7, 2023Apr 7, 2023

• IlluminaHumanMethylationAllergymanifest

  Public
  R

  •0•0•0•0•Updated Mar 1, 2023Mar 1, 2023

• IlluminaHumanMethylationAllergyanno.ilm12b3.hg19

  Public
  0•0•0•0•Updated Mar 1, 2023Mar 1, 2023

• IlluminaHumanMethylationAllergyanno.ilm12.hg19

  Public
  0•0•0•0•Updated Sep 15, 2022Sep 15, 2022

• tricycle

  Public
  R

  •8•27•13•0•Updated Mar 18, 2022Mar 18, 2022

• tricycle_paper_figs

  Public
  R

  •0•0•1•0•Updated Jan 6, 2022Jan 6, 2022

• spqn_paper

  Public
  R

  •0•0•0•0•Updated Dec 20, 2021Dec 20, 2021

• IlluminaHumanMethylationAllergyanno.ilm10.hg19

  Public
  0•0•0•0•Updated Aug 10, 2021Aug 10, 2021

• seurat-wrappers

  Public
  Community-provided extensions to Seurat

  R

  •

  GNU General Public License v3.0

  •143•0•0•0•Updated Jun 28, 2021Jun 28, 2021

• IlluminaHumanMethylationEPICanno.ilm10b2.hg19

  Public
  0•0•0•0•Updated Jun 18, 2021Jun 18, 2021

• IlluminaHumanMethylationEPICanno.ilm10b4.hg19

  Public
  R

  •0•0•0•0•Updated Jun 18, 2021Jun 18, 2021

• IlluminaHumanMethylationEPICanno.ilm10b3.hg19

  Public
  R

  •0•0•0•0•Updated Jun 18, 2021Jun 18, 2021