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    • Julia port of the Starsim agent-based disease modeling framework
      HTML
      MIT License
      1101Updated Apr 21, 2026Apr 21, 2026
    • Odin.jl

      Public
      A Julia toolkit for defining, simulating, and fitting compartmental infectious disease models (port of odin2/dust2/monty)
      Julia
      MIT License
      0200Updated Apr 20, 2026Apr 20, 2026
    • Julia
      MIT License
      2000Updated Apr 18, 2026Apr 18, 2026
    • Julia
      MIT License
      9000Updated Apr 17, 2026Apr 17, 2026
    • Implementations of algebraic rewriting techniques like DPO, SPO, SqPO.
      Julia
      MIT License
      7000Updated Apr 16, 2026Apr 16, 2026
    • Stochastic graph rewriting for agent based modeling
      Julia
      MIT License
      4000Updated Apr 16, 2026Apr 16, 2026
    • Catlab.jl

      Public
      A framework for applied category theory in the Julia language
      Julia
      MIT License
      67000Updated Apr 16, 2026Apr 16, 2026
    • June.jl

      Public
      HTML
      MIT License
      0000Updated Apr 7, 2026Apr 7, 2026
    • HTML
      MIT License
      0000Updated Mar 26, 2026Mar 26, 2026
    • R
      MIT License
      0250Updated Mar 12, 2026Mar 12, 2026
    • Optimal control for infectious disease epidemics
      Jupyter Notebook
      MIT License
      2620Updated Feb 18, 2026Feb 18, 2026
    • sir-julia

      Public
      Various implementations of the classical SIR model in Julia
      HTML
      MIT License
      422151071Updated Nov 20, 2025Nov 20, 2025
    • Replicants of published epidemiological models
      MIT License
      0200Updated Sep 29, 2025Sep 29, 2025
    • EpiCats

      Public
      Applied category theory applied to epidemiological models
      HTML
      MIT License
      21280Updated Aug 7, 2024Aug 7, 2024
    • epimdj

      Public
      A Julia port of the R code from Bjornstad's Epidemics: Models and Data Using R
      HTML
      MIT License
      1700Updated Jun 1, 2023Jun 1, 2023
    • Simulating chaotic dynamics in measles models
      Julia
      MIT License
      0000Updated Feb 10, 2023Feb 10, 2023
    • Overview of first Epirecipes meeting
      MIT License
      0000Updated Apr 25, 2019Apr 25, 2019
    • A cookbook of epidemiological models
      Jupyter Notebook
      MIT License
      7251301Updated Mar 1, 2019Mar 1, 2019
    • Introductory talk for Epirecipes 2018 meeting
      MIT License
      0100Updated Oct 1, 2018Oct 1, 2018
    • :sparkles: Build a beautiful and simple website in literally minutes. Demo at http://deanattali.com/beautiful-jekyll
      HTML
      MIT License
      17k100Updated Sep 28, 2018Sep 28, 2018
    • To-do list for epirecipes
      MIT License
      05570Updated Aug 7, 2018Aug 7, 2018
    • Binder for epirecipes via a Dockerfile
      Dockerfile
      MIT License
      0000Updated Jul 26, 2018Jul 26, 2018
    • epirecipes for NetLogo
      MIT License
      0000Updated Jul 3, 2018Jul 3, 2018
    • epirecipes for Javascript via @observablehq
      MIT License
      0000Updated Jul 3, 2018Jul 3, 2018
    • Singularity container for epirecipes
      MIT License
      0000Updated Jul 3, 2018Jul 3, 2018
    • epirecipes for Julia
      Julia
      Other
      1000Updated Jul 3, 2018Jul 3, 2018
    • epirecipes for R
      R
      0000Updated Jul 3, 2018Jul 3, 2018
    • epirecipes for Python
      Python
      MIT License
      0000Updated Jul 3, 2018Jul 3, 2018
    • Jupyter notebooks for epirecipes
      Jupyter Notebook
      MIT License
      0000Updated Jul 3, 2018Jul 3, 2018
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