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    29 repositories

    • Starsim.jl

      Public
      Julia port of the Starsim agent-based disease modeling framework
      HTML
      •
      MIT License
      •1•1•0•1•Updated Apr 21, 2026Apr 21, 2026

    • Odin.jl

      Public
      A Julia toolkit for defining, simulating, and fitting compartmental infectious disease models (port of odin2/dust2/monty)
      Julia
      •
      MIT License
      •0•2•0•0•Updated Apr 20, 2026Apr 20, 2026

    • DataMigrations.jl

      Public
      Julia
      •
      MIT License
      •2•0•0•0•Updated Apr 18, 2026Apr 18, 2026

    • StockFlow.jl

      Public
      Julia
      •
      MIT License
      •9•0•0•0•Updated Apr 17, 2026Apr 17, 2026

    • AlgebraicRewriting.jl

      Public
      Implementations of algebraic rewriting techniques like DPO, SPO, SqPO.
      Julia
      •
      MIT License
      •7•0•0•0•Updated Apr 16, 2026Apr 16, 2026

    • AlgebraicABMs.jl

      Public
      Stochastic graph rewriting for agent based modeling
      Julia
      •
      MIT License
      •4•0•0•0•Updated Apr 16, 2026Apr 16, 2026

    • Catlab.jl

      Public
      A framework for applied category theory in the Julia language
      Julia
      •
      MIT License
      •67•0•0•0•Updated Apr 16, 2026Apr 16, 2026

    • June.jl

      Public
      HTML
      •
      MIT License
      •0•0•0•0•Updated Apr 7, 2026Apr 7, 2026

    • odin-mtk-vignettes

      Public
      HTML
      •
      MIT License
      •0•0•0•0•Updated Mar 26, 2026Mar 26, 2026

    • gam-frameworks

      Public
      R
      •
      MIT License
      •0•2•5•0•Updated Mar 12, 2026Mar 12, 2026

    • EpiPolicies

      Public
      Optimal control for infectious disease epidemics
      Jupyter Notebook
      •
      MIT License
      •2•6•2•0•Updated Feb 18, 2026Feb 18, 2026

    • sir-julia

      Public
      Various implementations of the classical SIR model in Julia
      HTML
      •
      MIT License
      •42•215•107•1•Updated Nov 20, 2025Nov 20, 2025

    • EpiReplicants

      Public
      Replicants of published epidemiological models
      MIT License
      •0•2•0•0•Updated Sep 29, 2025Sep 29, 2025

    • EpiCats

      Public
      Applied category theory applied to epidemiological models
      HTML
      •
      MIT License
      •2•12•8•0•Updated Aug 7, 2024Aug 7, 2024

    • epimdj

      Public
      A Julia port of the R code from Bjornstad's Epidemics: Models and Data Using R
      HTML
      •
      MIT License
      •1•7•0•0•Updated Jun 1, 2023Jun 1, 2023

    • chaos-measles

      Public
      Simulating chaotic dynamics in measles models
      Julia
      •
      MIT License
      •0•0•0•0•Updated Feb 10, 2023Feb 10, 2023

    • epirecipes-overview-2018

      Public
      Overview of first Epirecipes meeting
      MIT License
      •0•0•0•0•Updated Apr 25, 2019Apr 25, 2019

    • epicookbook

      Public
      A cookbook of epidemiological models
      Jupyter Notebook
      •
      MIT License
      •725•13•0•1•Updated Mar 1, 2019Mar 1, 2019

    • epirecipes-intro-2018

      Public
      Introductory talk for Epirecipes 2018 meeting
      MIT License
      •0•1•0•0•Updated Oct 1, 2018Oct 1, 2018

    • epirecipes.github.io

      Public
      :sparkles: Build a beautiful and simple website in literally minutes. Demo at http://deanattali.com/beautiful-jekyll
      HTML
      •
      MIT License
      •17k•1•0•0•Updated Sep 28, 2018Sep 28, 2018

    • shopping-list

      Public
      To-do list for epirecipes
      MIT License
      •0•5•57•0•Updated Aug 7, 2018Aug 7, 2018

    • epirecipes-binder

      Public
      Binder for epirecipes via a Dockerfile
      Dockerfile
      •
      MIT License
      •0•0•0•0•Updated Jul 26, 2018Jul 26, 2018

    • epirecipes.nlogo

      Public
      epirecipes for NetLogo
      MIT License
      •0•0•0•0•Updated Jul 3, 2018Jul 3, 2018

    • epirecipes.js

      Public
      epirecipes for Javascript via @observablehq
      MIT License
      •0•0•0•0•Updated Jul 3, 2018Jul 3, 2018

    • epirecipes-singularity

      Public
      Singularity container for epirecipes
      MIT License
      •0•0•0•0•Updated Jul 3, 2018Jul 3, 2018

    • EpiRecipes.jl

      Public
      epirecipes for Julia
      Julia
      •
      Other
      •1•0•0•0•Updated Jul 3, 2018Jul 3, 2018

    • epirecipes-r

      Public
      epirecipes for R
      R
      •0•0•0•0•Updated Jul 3, 2018Jul 3, 2018

    • epyrecipes

      Public
      epirecipes for Python
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 3, 2018Jul 3, 2018

    • epinotebooks

      Public
      Jupyter notebooks for epirecipes
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jul 3, 2018Jul 3, 2018
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