Repositories list

• submission-deadlines

  Public
  forked from Shu Yang's submission-deadlines which is abased on the famous ⏰ AI conference deadline countdowns + Calendar overview with deadlines and conference dates.

  JavaScript

  •

  MIT License

  •995•0•0•0•Updated Jan 30, 2025Jan 30, 2025

• pennshenlab.github.io

  Public
  Ruby

  •1•0•0•0•Updated Jan 28, 2025Jan 28, 2025

• DDCCA

  Public
  Towards efficient model parameterizations in deep canonical correlation analysis with high-dimensional genetics modality for Alzheimer’s disease brain imaging traits

  Python

  •0•0•0•0•Updated Jan 10, 2025Jan 10, 2025

• QOT

  Public
  Efficient Mining of Mass Cytometry Data through Optimal Transport

  Jupyter Notebook

  •0•2•0•0•Updated Dec 4, 2024Dec 4, 2024

• GROT

  Public
  Jupyter Notebook

  •0•1•0•0•Updated Oct 30, 2024Oct 30, 2024

• BDM

  Public
  R

  •1•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• AD-SIMLR

  Public
  Clustering Alzheimer’s Disease Subtypes via Similarity Learning and Graph Diffusion. Building on top of and forked from the implementation of the SIMLR method: https://www.nature.com/articles/nmeth.4207, https://batzogloulabsu.github.io/SIMLR/

  MATLAB

  •

  GNU General Public License v3.0

  •61•2•0•0•Updated Oct 8, 2024Oct 8, 2024

• UNITO

  Public
  Automated Cytometric Gating with Human-Level Performance Using Bivariate Segmentation

  Python

  •

  Other

  •1•0•0•0•Updated Oct 7, 2024Oct 7, 2024

• FREEFORM

  Public
  Knowledge-Driven Feature Selection and Engineering for Genotype Data with Large Language Models

  Jupyter Notebook

  •0•6•0•0•Updated Oct 6, 2024Oct 6, 2024

• SDoH-KG

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Sep 30, 2024Sep 30, 2024

• AlzheimersDiseaseandRelatedDementias

  Public
  1•0•0•0•Updated Sep 16, 2024Sep 16, 2024

• Fair_GMs

  Public
  Jupyter Notebook

  •0•1•0•0•Updated Jul 22, 2024Jul 22, 2024

• PFERM

  Public
  Jupyter Notebook

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Jul 17, 2024Jul 17, 2024

• DCSM

  Public
  Python

  •1•1•0•0•Updated Jul 17, 2024Jul 17, 2024

• MentalChat16K

  Public
  MIT License

  •1•2•0•0•Updated Jun 13, 2024Jun 13, 2024

• DALK

  Public
  DALK: Dynamic Co-Augmentation of LLMs and KG to answer Alzheimer’s Disease Questions with Scientific Literature

  Python

  •9•0•0•0•Updated May 5, 2024May 5, 2024

• STREAMLINE-CB4AD

  Public
  Code Base for Alzheimer’s Disease (CB4AD). Building on top of STREAMLINE.

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •9•0•0•1•Updated Feb 15, 2024Feb 15, 2024

• Homological_Landscape

  Public
  Implementation of the Paper "Homological landscape of human brain functional sub-circuits".

  Jupyter Notebook

  •1•2•0•0•Updated Jan 17, 2024Jan 17, 2024

• DWS-Loss

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Jan 1, 2024Jan 1, 2024

• Fair_CCA

  Public
  MATLAB

  •4•7•0•0•Updated Nov 16, 2023Nov 16, 2023

• GIANT

  Public
  Python

  •

  MIT License

  •1•0•0•0•Updated Jul 22, 2023Jul 22, 2023

• SBFA

  Public
  Integrative Analysis of Multi-omics and Imaging Data with Incorporation of Biological Information via Structural Bayesian Factor Analysis

  R

  •

  MIT License

  •2•0•0•0•Updated Jul 10, 2023Jul 10, 2023

• ad_colocalization

  Public
  MIT License

  •1•0•0•0•Updated Jul 10, 2023Jul 10, 2023

• FACIMS

  Public
  Python

  •1•2•0•0•Updated Jul 2, 2023Jul 2, 2023

• Ethics_and_Policy_Resources_for_PennAITech

  Public
  MIT License

  •0•0•0•0•Updated Apr 18, 2023Apr 18, 2023

• PMSCCA

  Public
  Preference Matrix Guided Sparse Canonical Correlation Analysis

  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Mar 21, 2023Mar 21, 2023

• MTS2CCA

  Public
  MATLAB

  •2•0•0•0•Updated Aug 31, 2022Aug 31, 2022

• adomics

  Public
  AD omics pipelines

  HTML

  •1•0•0•0•Updated Aug 31, 2022Aug 31, 2022

• smr-pipeline

  Public
  SMR Analytic Pipeline

  0•0•0•0•Updated Mar 22, 2022Mar 22, 2022

• temporal-GNN

  Public
  Python

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  MIT License

  •2•0•0•0•Updated Oct 25, 2021Oct 25, 2021