Skip to content

@FNNDSC FNNDSC / BCH

All

    Repositories list

    589 repositories

    • chrisproject.org

      Public
      Website and documentation of ChRIS project
      MDX
      •
      MIT License
      •2•0•0•2•Updated Oct 27, 2026Oct 27, 2026

    • slidedown

      Public
      Text-first presentation compiler with .directive{} syntax
      Python
      •0•1•0•0•Updated Oct 25, 2026Oct 25, 2026

    • pl-dicom_audit

      Public
      A ChRIS plugin to generate a DICOM anonymization audit report
      Shell
      •
      MIT License
      •0•0•0•1•Updated Oct 24, 2026Oct 24, 2026

    • pl-dicom_unpack

      Public
      A ChRIS plugin to unpack dicom volumes into individual slices
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 23, 2026Oct 23, 2026

    • CHRIS_docs

      Public
      Documentation for CHRIS
      Shell
      •
      MIT License
      •17•14•15•2•Updated Oct 19, 2026Oct 19, 2026

    • pl-dicom_pixel_redact

      Public
      A ChRIS plugin to detect and redact PHI embedded in DICOM pixel data
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 16, 2026Oct 16, 2026

    • pl-freesurfer

      Public
      FreeSurfer 8.2 recon-all over every subject directory of an input tree: a ChRIS DS plugin on pl-shexec
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 15, 2026Oct 15, 2026

    • pfdo

      Public
      An application that provides the base functionality to use/demo the `pftree` callback usage.
      Python
      •
      Apache License 2.0
      •1•0•3•0•Updated Oct 15, 2026Oct 15, 2026

    • pftree

      Public
      A class that constructs a dictionary representation of paths/files in a filesystem
      Python
      •
      MIT License
      •0•1•2•0•Updated Oct 15, 2026Oct 15, 2026

    • pl-shexec

      Public
      A ChRIS DS plugin that uses `pfdo_run` to provide shell-like command functionality
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 15, 2026Oct 15, 2026

    • hostlib

      Public
      Run a program, stream its output, and keep the record
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 15, 2026Oct 15, 2026

    • pfdo_run

      Public
      Python
      •
      Apache License 2.0
      •1•0•2•0•Updated Oct 15, 2026Oct 15, 2026

    • pl-dymap

      Public
      Map a ChRIS pipeline over the directories of an input: one workflow per item, run in parallel
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 15, 2026Oct 15, 2026

    • pl-dicom_headerEdit

      Public
      A DS plugin around pfdicom_tagSub that allows for editing DICOM headers. Most often used to anonymize DICOMs
      Python
      •
      MIT License
      •0•1•0•0•Updated Oct 14, 2026Oct 14, 2026

    • pflog

      Public
      A simple script and module for using the `pftel-client` library to communicate with a `pftel` server
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 14, 2026Oct 14, 2026

    • pftag

      Public
      An opinionated SGML string token parser.
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 14, 2026Oct 14, 2026

    • pl-dicom_repack

      Public
      A ChRIS plugin to repack individual slices to a single volume
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 13, 2026Oct 13, 2026

    • intent-server

      Public
      Python
      •0•0•0•0•Updated Oct 11, 2026Oct 11, 2026

    • pl-dyanon

      Public
      A ChRIS plugin to dynamically anonymize DICOMs in bulk
      Python
      •
      MIT License
      •0•1•0•0•Updated Sep 14, 2026Sep 14, 2026

    • pl-dicom_anonymize

      Public
      A ChRIS plugin to anonymize DICOM files
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 9, 2026Sep 9, 2026

    • pl-pacs_query

      Public
      A ChRIS plugin to query a remote PACS
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 1, 2026Sep 1, 2026

    • DTIPrep.AppImage

      Public
      AppImage for DTIPrep
      Makefile
      •
      MIT License
      •0•0•0•0•Updated Aug 20, 2026Aug 20, 2026

    • pl-dy_regiFlow

      Public
      A dynamic ChRIS plugin to check PACS registration and control workflows
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 18, 2026Aug 18, 2026

    • pl-dypxFlow

      Public
      A dynamic ChRIS plugin to control PACS related workflows in CUBE
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 7, 2026Aug 7, 2026

    • pl-dicom_filter

      Public
      A ChRIS plugin to filter dicom files by applying filters on dicom headers
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 7, 2026Aug 7, 2026

    • freeview.AppImage

      Public
      A minimized, portable freeview executable
      Shell
      •
      Other
      •0•0•2•0•Updated Aug 6, 2026Aug 6, 2026

    • OSS-deidentification-libraries

      Public
      Monorepo containing various OSS deidentification libraries and e2e anonymization pipeline scripts
      Python
      •0•0•0•0•Updated Jul 27, 2026Jul 27, 2026

    • chell

      Public
      TypeScript
      •
      MIT License
      •0•0•0•0•Updated Jun 20, 2026Jun 20, 2026

    • chili

      Public
      A nodejs CLI REPL for ChRIS
      TypeScript
      •
      MIT License
      •0•1•1•1•Updated Jun 20, 2026Jun 20, 2026

    • salsa

      Public
      TypeScript
      •
      MIT License
      •0•0•0•0•Updated Jun 20, 2026Jun 20, 2026
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.