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    • ensembl-genomio

      Public
      Pipelines to turn basic genomic data into Ensembl cores and back
      Python
      Apache License 2.0
      11903Updated Apr 14, 2026Apr 14, 2026
    • ensembl-genes

      Public
      Python Ensembl Gene Annotation code source repository
      Python
      Apache License 2.0
      4408Updated Apr 14, 2026Apr 14, 2026
    • hprc-qc

      Public
      Perl
      Apache License 2.0
      1231Updated Apr 14, 2026Apr 14, 2026
    • ensembl-genes-nf

      Public
      Ensembl Genebuild NextFlow pipelines
      Nextflow
      Apache License 2.0
      6202Updated Apr 14, 2026Apr 14, 2026
    • ensembl-thoas

      Public
      Son of Ariadne, a GraphQL server and supporting software
      Python
      Apache License 2.0
      23010Updated Apr 13, 2026Apr 13, 2026
    • distiller

      Public
      Python
      Apache License 2.0
      0001Updated Apr 13, 2026Apr 13, 2026
    • ensembl-client

      Public
      Ensembl beta client
      TypeScript
      Apache License 2.0
      51603Updated Apr 13, 2026Apr 13, 2026
    • ensembl-webcode

      Public
      The code to run an Ensembl website
      Perl
      Apache License 2.0
      522203Updated Apr 13, 2026Apr 13, 2026
    • Metadata API for beta.ensembl.org
      Python
      Apache License 2.0
      1011Updated Apr 13, 2026Apr 13, 2026
    • ensembl-vep

      Public
      The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
      Perl
      Apache License 2.0
      178543676Updated Apr 13, 2026Apr 13, 2026
    • Ensembl shared elements
      TypeScript
      Apache License 2.0
      0000Updated Apr 10, 2026Apr 10, 2026
    • The Ensembl Compara Perl API and SQL schema
      Perl
      Apache License 2.0
      695503Updated Apr 10, 2026Apr 10, 2026
    • Plugins for an Ensembl website
      JavaScript
      Apache License 2.0
      48903Updated Apr 10, 2026Apr 10, 2026
    • Python
      Apache License 2.0
      4204Updated Apr 10, 2026Apr 10, 2026
    • A collection of shared Ensembl modules used in NextFlow pipelines
      Nextflow
      3313Updated Apr 10, 2026Apr 10, 2026
    • ensembl_genome_metadata schema SQLAlchemy ORM layer
      Python
      Apache License 2.0
      2203Updated Apr 10, 2026Apr 10, 2026
    • "dauphin" style-compiler for genome browser
      Rust
      00101Updated Apr 9, 2026Apr 9, 2026
    • Python
      Apache License 2.0
      0001Updated Apr 9, 2026Apr 9, 2026
    • File parsing and writing code for Ensembl
      Perl
      Apache License 2.0
      191001Updated Apr 9, 2026Apr 9, 2026
    • Ensembl Production code
      Perl
      Apache License 2.0
      451304Updated Apr 9, 2026Apr 9, 2026
    • The Ensembl Variation Perl API and SQL schema
      Perl
      Apache License 2.0
      5930015Updated Apr 9, 2026Apr 9, 2026
    • documentation for the new Ensembl site
      TypeScript
      6104Updated Apr 7, 2026Apr 7, 2026
    • Python
      Apache License 2.0
      71113Updated Apr 7, 2026Apr 7, 2026
    • ensembl

      Public
      The Ensembl Core Perl API and SQL schema
      Perl
      Apache License 2.0
      788322Updated Apr 7, 2026Apr 7, 2026
    • Language agnostic RESTful data access to Ensembl data over HTTP
      Perl
      Apache License 2.0
      6215070Updated Apr 7, 2026Apr 7, 2026
    • tagene

      Public
      Repository hosting the TAGENE annotation pipeline
      Perl
      Apache License 2.0
      1200Updated Apr 6, 2026Apr 6, 2026
    • Code for checking Ensembl databases during release production
      Perl
      Apache License 2.0
      28500Updated Apr 1, 2026Apr 1, 2026
    • 1322Updated Mar 31, 2026Mar 31, 2026
    • Airflow operators to submit and monitor the slurm jobs
      Python
      Apache License 2.0
      1001Updated Mar 30, 2026Mar 30, 2026
    • Python
      Apache License 2.0
      4004Updated Mar 24, 2026Mar 24, 2026
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