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    • ensembl-production

      Public
      Ensembl Production code
      Perl
      Apache License 2.0
      451304Updated Apr 9, 2026Apr 9, 2026
    • ensembl-client

      Public
      Ensembl beta client
      TypeScript
      Apache License 2.0
      51603Updated Apr 9, 2026Apr 9, 2026
    • ensembl-variation

      Public
      The Ensembl Variation Perl API and SQL schema
      Perl
      Apache License 2.0
      5930015Updated Apr 9, 2026Apr 9, 2026
    • ensembl-vep

      Public
      The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
      Perl
      Apache License 2.0
      178541678Updated Apr 9, 2026Apr 9, 2026
    • public-plugins

      Public
      Plugins for an Ensembl website
      JavaScript
      Apache License 2.0
      48903Updated Apr 8, 2026Apr 8, 2026
    • ensembl-web-metadata-api

      Public
      Metadata API for beta.ensembl.org
      Python
      Apache License 2.0
      1012Updated Apr 8, 2026Apr 8, 2026
    • ensembl-thoas

      Public
      Son of Ariadne, a GraphQL server and supporting software
      Python
      Apache License 2.0
      2309Updated Apr 8, 2026Apr 8, 2026
    • ensembl_genome_metadata schema SQLAlchemy ORM layer
      Python
      Apache License 2.0
      2202Updated Apr 8, 2026Apr 8, 2026
    • hprc-qc

      Public
      Perl
      Apache License 2.0
      1231Updated Apr 7, 2026Apr 7, 2026
    • Ensembl Genebuild NextFlow pipelines
      Nextflow
      Apache License 2.0
      6202Updated Apr 7, 2026Apr 7, 2026
    • documentation for the new Ensembl site
      TypeScript
      6104Updated Apr 7, 2026Apr 7, 2026
    • Python
      Apache License 2.0
      71113Updated Apr 7, 2026Apr 7, 2026
    • ensembl-genes

      Public
      Python Ensembl Gene Annotation code source repository
      Python
      Apache License 2.0
      4408Updated Apr 7, 2026Apr 7, 2026
    • ensembl

      Public
      The Ensembl Core Perl API and SQL schema
      Perl
      Apache License 2.0
      788322Updated Apr 7, 2026Apr 7, 2026
    • The Ensembl Compara Perl API and SQL schema
      Perl
      Apache License 2.0
      695503Updated Apr 7, 2026Apr 7, 2026
    • Ensembl shared elements
      TypeScript
      Apache License 2.0
      0001Updated Apr 7, 2026Apr 7, 2026
    • ensembl-rest

      Public
      Language agnostic RESTful data access to Ensembl data over HTTP
      Perl
      Apache License 2.0
      6215070Updated Apr 7, 2026Apr 7, 2026
    • tagene

      Public
      Repository hosting the TAGENE annotation pipeline
      Perl
      Apache License 2.0
      1200Updated Apr 6, 2026Apr 6, 2026
    • Code for checking Ensembl databases during release production
      Perl
      Apache License 2.0
      28500Updated Apr 1, 2026Apr 1, 2026
    • 1222Updated Mar 31, 2026Mar 31, 2026
    • Airflow operators to submit and monitor the slurm jobs
      Python
      Apache License 2.0
      1001Updated Mar 30, 2026Mar 30, 2026
    • The code to run an Ensembl website
      Perl
      Apache License 2.0
      522203Updated Mar 30, 2026Mar 30, 2026
    • "dauphin" style-compiler for genome browser
      Rust
      00101Updated Mar 27, 2026Mar 27, 2026
    • Python
      Apache License 2.0
      4004Updated Mar 24, 2026Mar 24, 2026
    • Metazoan production helper library and script to import ad-hoc annotations.
      Shell
      Apache License 2.0
      3101Updated Mar 23, 2026Mar 23, 2026
    • A collection of shared Ensembl modules used in NextFlow pipelines
      Nextflow
      3314Updated Mar 20, 2026Mar 20, 2026
    • distiller

      Public
      Python
      Apache License 2.0
      0001Updated Mar 20, 2026Mar 20, 2026
    • Plugins for the Ensembl Variant Effect Predictor (VEP)
      Perl
      Apache License 2.0
      12416763Updated Mar 20, 2026Mar 20, 2026
    • Perl
      3300Updated Mar 19, 2026Mar 19, 2026
    • File parsing and writing code for Ensembl
      Perl
      Apache License 2.0
      191002Updated Mar 19, 2026Mar 19, 2026
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