Biodata Analysis Group

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67 repositories

BiodataAnalysisGroup.github.io
Public
Biodata Analysis Group website
HTML
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MIT License
•1•1•0•0•Updated Mar 4, 2026Mar 4, 2026
DOME-Training-Course
Public
This a repository that holds the training course for the DOME ML Recommendations.
TeX
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Other
•0•0•0•0•Updated Mar 1, 2026Mar 1, 2026
ELIXIR-BFSP-Odyssey-Lesson
Public template
ELIXIR BFSP Odyssey Lesson
TeX
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Other
•8•0•0•0•Updated Mar 1, 2026Mar 1, 2026
ELIXIR-BFSP-Odyssey
Public
Exploring Molecular Biodiversity: An Interactive R Shiny App Approach
r biodiversity shinyapp
r biodiversity shinyapp
R
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Other
•7•4•12•2•Updated Feb 27, 2026Feb 27, 2026
inab-inhouse-analyses
Public
SCSS
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MIT License
•3•0•0•0•Updated Feb 26, 2026Feb 26, 2026
RNAseq_analysis
Public
This repository includes scripts for RNAseq analysis
bash r rnaseq-analysis
bash r rnaseq-analysis
R
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MIT License
•2•0•0•0•Updated Feb 26, 2026Feb 26, 2026
lncAPNet
Public
Vasili's Phd project
Jupyter Notebook
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MIT License
•1•0•0•1•Updated Feb 25, 2026Feb 25, 2026
ahead-resources
Public
R
•3•0•0•0•Updated Feb 17, 2026Feb 17, 2026
immunovisual
Public
A collection of charts made with the R programming language, focusing on immunogenetics analyses. Different charts types are being organized into multiple secti…
HTML
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MIT License
•2•0•0•0•Updated Feb 17, 2026Feb 17, 2026
ERGO-helpers
Public
Python
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MIT License
•0•0•0•0•Updated Jan 27, 2026Jan 27, 2026
Mongoose
Public
Jupyter Notebook
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MIT License
•0•0•0•0•Updated Jan 12, 2026Jan 12, 2026
APNet
Public
Jupyter Notebook
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MIT License
•0•0•0•1•Updated Dec 17, 2025Dec 17, 2025
synth4bench
Public
A pipeline for generating synthetic genomics data for the evaluation of tumor-only somatic variant calling algorithms.
benchmarking bioinformatics variant-calling
benchmarking bioinformatics variant-calling synthetic-dataset-generation
R
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MIT License
•2•7•0•0•Updated Dec 3, 2025Dec 3, 2025
ahead-indicators
Public
HTML
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Apache License 2.0
•0•0•0•0•Updated Nov 10, 2025Nov 10, 2025
plant-curation
Public
R
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MIT License
•3•0•0•0•Updated Nov 5, 2025Nov 5, 2025
Elixir-GR-ML
Public
Mapping AI within the Greek landscape
R
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MIT License
•1•0•1•0•Updated Nov 5, 2025Nov 5, 2025
Subcellular-Localization-Prediction
Public
Python
•1•0•0•0•Updated Aug 28, 2025Aug 28, 2025
Morphophen_PD_perturb_modelling
Public
Jupyter Notebook
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MIT License
•0•0•0•0•Updated Aug 27, 2025Aug 27, 2025
virtual-tutorial-perturbation-modelling
Public
Jupyter Notebook
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MIT License
•3•2•0•0•Updated Jul 15, 2025Jul 15, 2025
tripr
Public
T-cell Receptor/Immunoglobulin Profiler {tripr}
r bioconductor clonotype
r bioconductor clonotype
R
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MIT License
•4•3•1•0•Updated Jun 27, 2025Jun 27, 2025
Multi-Drug-Perturbations
Public
MIT License
•0•0•0•0•Updated Jun 26, 2025Jun 26, 2025
BioHackathon
Public
Jupyter Notebook
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MIT License
•0•1•30•1•Updated May 29, 2025May 29, 2025
training-material
Public
A collection of Galaxy-related training material
HTML
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MIT License
•1.1k•0•0•0•Updated Apr 16, 2025Apr 16, 2025
lncAPNet_ECCB2024
Public
This repository Created for ECCB2024 - Turku, Finland
Jupyter Notebook
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MIT License
•0•1•0•0•Updated Mar 12, 2025Mar 12, 2025
offspring
Public
R
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Other
•2•0•0•0•Updated Mar 12, 2025Mar 12, 2025
Cyld-regulation-of-bcell-maturation
Public
R
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MIT License
•0•0•0•0•Updated Feb 12, 2025Feb 12, 2025
vivi
Public
MIT License
•3•0•0•0•Updated Jan 7, 2025Jan 7, 2025
2024-12-ml-biocommons-au
Public
Creative Commons Attribution 4.0 International
•3•2•0•0•Updated Dec 5, 2024Dec 5, 2024
.github
Public
0•0•0•0•Updated Nov 19, 2024Nov 19, 2024
UMIc
Public
A framework implementing a method for UMI deduplication and reads correction.
R
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MIT License
•4•9•3•1•Updated Oct 25, 2024Oct 25, 2024