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Open Problems in Single-Cell Analysis

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https://openproblems.bio

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openproblems openproblems Public

Formalizing and benchmarking open problems in single-cell genomics

Shell 329 82
website website Public

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TeX 4 8

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Showing 10 of 35 repositories

task_grn_inference Public

openproblems-bio/task_grn_inference’s past year of commit activity

Python 8 MIT 2 1 (1 issue needs help) 0 Updated Mar 12, 2025
task_cyto_batch_integration Public

openproblems-bio/task_cyto_batch_integration’s past year of commit activity

Python 1 MIT 1 8 0 Updated Mar 12, 2025
website Public
Legacy website

openproblems-bio/website’s past year of commit activity

TeX 4 CC-BY-4.0 8 32 (1 issue needs help) 13 Updated Mar 12, 2025
task_ist_preprocessing Public

openproblems-bio/task_ist_preprocessing’s past year of commit activity

Python 5 MIT 1 1 3 Updated Mar 10, 2025
task_batch_integration Public

openproblems-bio/task_batch_integration’s past year of commit activity

Python 4 MIT 3 6 3 Updated Mar 7, 2025
task_spatial_simulators Public
Benchmarking spatial simulators

openproblems-bio/task_spatial_simulators’s past year of commit activity

R 0 MIT 0 0 2 Updated Mar 7, 2025
task_spatial_decomposition Public

openproblems-bio/task_spatial_decomposition’s past year of commit activity

Python 0 0 1 0 Updated Mar 6, 2025
task_dimensionality_reduction Public

openproblems-bio/task_dimensionality_reduction’s past year of commit activity

Python 1 MIT 2 5 1 Updated Mar 6, 2025
common_resources Public
Common resources for various benchmarks.

openproblems-bio/common_resources’s past year of commit activity

Nextflow 0 MIT 1 1 1 Updated Mar 6, 2025
task_foundation_models Public

openproblems-bio/task_foundation_models’s past year of commit activity

Shell 0 MIT 0 1 2 Updated Mar 6, 2025

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